Fluviibacter phosphoraccumulans: SHINM1_022080
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Entry
SHINM1_022080 CDS
T07031
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fpho
Fluviibacter phosphoraccumulans
Pathway
fpho03030
DNA replication
fpho03410
Base excision repair
fpho03420
Nucleotide excision repair
fpho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHINM1_022080 (polA)
03410 Base excision repair
SHINM1_022080 (polA)
03420 Nucleotide excision repair
SHINM1_022080 (polA)
03440 Homologous recombination
SHINM1_022080 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpho03032
]
SHINM1_022080 (polA)
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_022080 (polA)
Enzymes [BR:
fpho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHINM1_022080 (polA)
DNA replication proteins [BR:
fpho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SHINM1_022080 (polA)
DNA repair and recombination proteins [BR:
fpho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SHINM1_022080 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHINM1_022080 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF6079
Motif
Other DBs
NCBI-ProteinID:
BCA66606
LinkDB
All DBs
Position
complement(2230491..2233229)
Genome browser
AA seq
912 aa
AA seq
DB search
MPTLLLVDGSSYLYRAFHALPDLRNQSGDPTGALYGMISMLRRLTSDIDAEYRACIFDAS
GPTFRDTLYSEYKSHRPPMPEDLAKQIEPIHAVVRALGWPLLMESGVEADDVIATLAKQA
AAAGFSVVVSTGDKDLAQLVTPQVTLVNTMSNERLDVAGVEAKFGVTPERITDYLALVGD
TADNIPGVPKVGPKTAAKWIQTYGDLDGVIAQAADIKGVVGENLRSHLDFLPLGRTLTTV
KTDVSLPVAITDLLAKPEDQNILRDVFRHNGFKTWLKAIDEPGAGTKTAAKTEAEAPLAL
LPDDGAHRVHYETILDEAALNRWLEKIQTAERVALDTETTSLDEQQARLVGISFAVAPGE
AAYLPLAHDGPDTPAQLPFADTLARLKPWLEDSTPRKILQHAKYDQHVFANHGIRLSGIV
DDTLLAAYVLEAGQVSPGALELGTLARRHLGLPTIPYEAICGKGANQIGFNQVAVADASA
YAAEDADITLRIAERLLPRLACEPGLESTYRNLELPTAQVLFTMEQNGVLIDNQQLADQS
HALGERMLALETEAHTLAGQSFNLNSPKQLAEILFTQQGLPVKKKTASGTPSTDEEVLSE
LALDFPLPRVLLEYRSIAKLKNTYCDKLPQRINPATGRVHTHYSQTTAVTGRLASSDPNL
QNIPVRTPEGRRIRAAFIARPGHSIFSADYSQIELRIMAHLSADNGLLSAFAQGEDIHRA
TAAEVFGVMPLEVDDNQRRAAKAINFGLIYGMSAFGLAKQLGIERGAAQTYIDRYFDRYP
GVARYMEETRQSAHQHGYVETVFGRRLWLPDLKAGQQGRRQGAERAAINAPMQGTAADLI
KLAMIAVQDWLTREQLQSLLIMQVHDELVLEVPDHERARVSEALGPLMTNVAKLKVPLVV
DIGIGPNWDDAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcccactctactgctcgtcgacggttcatcctacctgtaccgtgcatttcatgcactg
cctgacttgcgcaatcagtcgggcgaccctaccggtgcactgtacggcatgatctcgatg
ctgcgccgactgaccagcgatatcgatgcagaataccgcgcctgtatttttgatgccagc
ggccccaccttccgcgacactctttatagcgagtacaagtcgcatcgcccgccgatgccc
gaagatctggccaagcagattgaaccgattcatgccgtagtccgtgcgcttggctggccg
ctactgatggaaagcggtgtcgaagccgatgacgtgatcgccaccctggccaagcaagcg
gccgccgcaggcttttcagtggttgtctctaccggcgacaaggatctggcgcagctggtg
acgccgcaggtgacgctggtcaacaccatgagcaacgagcgactggatgtagctggggtt
gaagccaagttcggcgtcacgccggaacgcattacggattacctggcgctggttggcgat
accgccgacaacattccgggtgtgcccaaggtggggccaaaaaccgcggccaaatggata
cagacctacggggacctcgatggcgtcatcgcccaagccgccgatatcaaaggggttgtc
ggcgagaacctgcgcagccacctcgattttctgccactcggacgcacgctgacgaccgtt
aaaaccgatgtcagcctacccgtggccatcacggatctcctcgctaaaccggaagatcag
aatattctgcgcgacgtgtttcgccataacggctttaaaacctggctcaaggccattgac
gaaccaggcgctggcacaaagactgcagccaaaacggaggccgaagcaccgttggcgctc
ttgcctgatgatggggcgcaccgtgtccattacgaaactatattggacgaggccgcactc
aaccgctggctagaaaaaatccagactgcggaacgcgttgccctggacaccgaaaccacc
agcctcgacgaacagcaagcgcgcctggtcggcatttcttttgccgtcgcccccggtgag
gccgcctatttaccgctggcgcatgatggcccggacacgcccgctcaactccctttcgca
gatacattggcccgcctgaagccctggctcgaagacagcacgcccagaaaaattctgcag
cacgccaaatacgatcagcacgtgtttgccaatcacggcattcgtctatccggcattgtt
gatgacaccttactggccgcctatgtactggaggctggccaagttagccccggtgccctt
gaattaggcacgctagcgcgccgacacttgggcctgcccacgattccttatgaagccatc
tgcggcaaaggggccaaccagatcggctttaatcaagtggccgttgccgatgcatcggca
tatgccgccgaagatgccgacattacactacgcattgccgaacgactcttgccccgactg
gcctgcgaacctgggctggaaagcacctaccgcaatctggaactccctaccgcgcaagtg
cttttcaccatggaacaaaacggcgttctgatcgataaccagcaattggccgatcaaagc
cacgcactcggtgagcgcatgctggcactggaaacggaagcacatacgctggccggccag
agttttaatctgaactcacccaaacaactggccgagattctgtttacgcaacagggcctg
cccgtcaaaaagaaaaccgcctccggcacaccatcgactgacgaagaagtgctctccgag
ttggcgctcgacttcccgctgccgcgcgtactgctggaataccgcagcatcgccaagtta
aagaacacctactgcgataagttgccccagcgcatcaacccggccactggtcgtgtccac
acgcattattcgcaaacaacggcagtgaccggtcgtctggccagctccgacccgaatctg
cagaacattccggtacgcacaccggaaggtcgccgcatccgagcagcctttatcgcccgc
cccggtcacagcattttctccgctgactactcgcagatcgaactgcgcatcatggcgcat
ctctctgccgacaatgggttgcttagtgcttttgcacaaggcgaagacattcaccgcgct
acagcggccgaagtctttggtgttatgcctttagaggtcgatgacaaccagcggcgtgcc
gccaaagccatcaacttcgggctcatttacggcatgagtgcctttggcctggccaagcaa
ctgggtatcgaacggggtgcggctcaaacctacattgatcgctacttcgatcgctatccc
ggcgttgcccgttacatggaagagacgcgacaatccgcgcatcagcatggctatgttgaa
accgtattcggccgccgcttatggctgcctgatctcaaggcgggtcagcaggggcggcgc
cagggtgccgagcgcgccgccatcaacgccccgatgcaaggcactgcagccgatctgatc
aagctggccatgattgctgtgcaggattggttaacgagagagcaactgcagagcttactc
atcatgcaggtgcacgatgaactggtgctggaagtgccggatcacgagcgtgcccgcgtc
agcgaggcactcggcccgctgatgaccaacgtggccaaactgaaggtgccgctggtggtt
gacatcggcatcggcccaaattgggacgatgcccactaa
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