Fluviibacter phosphoraccumulans: SHINM1_022420
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Entry
SHINM1_022420 CDS
T07031
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fpho
Fluviibacter phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
fpho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpho03400
]
SHINM1_022420
Enzymes [BR:
fpho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SHINM1_022420
DNA repair and recombination proteins [BR:
fpho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SHINM1_022420
Prokaryotic type
SHINM1_022420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BCA66640
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All DBs
Position
2266971..2268554
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AA seq
527 aa
AA seq
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MALTVANPQGMQVVWFKRDLRVHDHAALTAAAQAGKVLCIYVCEPQLWQQPDASGRQWHF
LLESLSDLQRSLARRGSRLHVLVGDMTEVLEKLHQQLPIAALYAHEETGNDYTYRRDIAV
GQWCRQHRVAWQEFRQFGVVRRLRHRDDWKAHWESHNAAATKSVPAANWAQLGCLPGEVA
LKDLPQVMQRLLPGLLDDNPVARQRGGRQSGIAILEDFLQRRSRQYRGGISSPLSATSAC
SRLSAHLAYGCLSLREIVQATQRHLASATDLNAHHQRGLRAFISRLYWHCHFIQKLESQP
DIEWRNLHRGYDGLREADWNDAHFVALIHARTGWPLVDACVTMLRETGWLNFRMRAMLVS
VASYALWLHWRPVGEWLARQFVDYEPGIHWSQMQMQAGTTGINTTRVYNPIKQARDQDPE
GRFVRHWLPYMRQVPDAWLFEPWRMPDDLQRQHGLVPGRDLPLPLVDFENATRLAKARVQ
TLRRQPDVREAKAAIVDKHGSRQRTSQQRRARTRQAPETRLQLDLAL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaccgtagctaacccacaaggcatgcaagtcgtttggttcaagcgtgatttg
cgtgtgcatgaccatgccgcgctgactgccgccgcccaagcaggcaaagtcctgtgcatt
tacgtgtgcgagccccagctttggcaacagcctgatgcctccggacgtcaatggcatttt
ttgctggaaagcctctctgatttgcagcgcagcttggcccgaagagggtcacggttacat
gtgctggtcggtgatatgacggaagtgctggaaaaactccaccagcagctgcccattgcc
gcgctttacgcacatgaagaaaccggtaacgactacacgtatcggcgagatatcgctgtg
ggtcagtggtgtcgccagcaccgtgttgcctggcaggagtttcgccagttcggcgtggtc
cgacggttgcgtcaccgcgatgactggaaagcccactgggaaagccataacgcggctgcg
accaaatccgtgcctgcggcaaactgggcccaacttgggtgcttgcccggggaggttgcg
ctcaaggatttacctcaggtgatgcaacgcctgttgccaggcctgctggatgacaaccct
gtcgctcgccaacggggagggcggcagagcggcatcgccattctggaagatttcttacag
cggcgtagccgccaataccgtgggggcatctcttcaccgctgtcagcaacttctgcctgt
tccaggctatctgcgcatttagcctacggttgtctgagcttacgcgagatcgttcaggca
acgcagcggcacctggccagcgccaccgatttaaacgcccatcaccagcgtgggctacgc
gcatttatcagcagactctactggcattgtcactttattcagaagctggaaagccaaccg
gatattgagtggcgcaacctgcaccggggctacgatggtctgcgagaagcggattggaat
gacgcgcattttgtagcgttgatccatgcgcgtaccggctggccgttagtcgatgcctgc
gtcacgatgctgcgcgagacgggttggctcaatttccgcatgcgtgccatgctcgtgtcg
gtggcttcttatgccctctggttgcattggcgaccagtcggagagtggctggcacgtcag
ttcgtagattacgaaccgggcattcactggagtcagatgcaaatgcaggcgggtaccacc
ggcattaataccacgcgcgtttacaatccgatcaagcaggccagagaccaagaccctgaa
ggtcgcttcgtccgccactggctgccctacatgcggcaggtgccggatgcctggctgttt
gagccctggcgcatgccggacgatttacagcgccaacatgggttggtgcccggcagggat
ctgcccttaccgctcgtcgattttgaaaacgctacgcggctggcaaaggcgcgtgtccag
acattgcgtcggcagcccgatgtgcgtgaggcgaaagctgctatcgttgacaaacatggt
tcccgccaacgcacgtcacagcagcgtcgcgcgcgtacccgtcaagcgcccgagacccgc
ctgcaactggatctcgcgctataa
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