Francisella philomiragia O#319-029: BF30_1257
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Entry
BF30_1257 CDS
T03617
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpi
Francisella philomiragia O#319-029
Pathway
fpi03420
Nucleotide excision repair
fpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF30_1257 (uvrD)
03430 Mismatch repair
BF30_1257 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpi03400
]
BF30_1257 (uvrD)
Enzymes [BR:
fpi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF30_1257 (uvrD)
DNA repair and recombination proteins [BR:
fpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF30_1257 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BF30_1257 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
AJI46703
LinkDB
All DBs
Position
1271694..1273922
Genome browser
AA seq
742 aa
AA seq
DB search
MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDINYTHIYTAYEERLLL
DNALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLSRVL
EESCIYTSIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGNKTL
DTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLET
VINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESKKIQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTVG
SQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKEFYT
VDFGVDVGQKILLADIANLVKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagactttctttcagggttaaatccccaacaaaaaaaagcgaccttgcta
gaggatcgtaattctttgatacttgctggagccggtagtggcaaaacaaaagttttaact
tctcgtatagcctatctttgtcgtgataaaggagtatctgttgaaaatattctggctgta
acattcacaaacaaagcagctaaagaaatccaacatcgagttgagaaaatgcttggtatt
tcaacttttggtatgtggataggtacttttcacggtattgctcatagattattacgtaag
catgctcatgagttgggcctagataagaactttaggattcttgatcaagatgagcaagct
caattaatcaaaaaagtaattaagagtttggatcttgatgataaaaaatatccaccaaaa
ttattgcaaaactttattaataaacaaaaagataaggctgttcgtagtaacaaattaaca
aagcagtatgatattaattatactcatatttatactgcttatgaagagaggttgctgtta
gataatgctttagattttgccgacttacttttgtatttatatgaattgttttctcttaac
caacagcttagagaatactatcagagtttattcaggtatattttgatagacgagtttcag
gatactaaccaagtccaatatatgtggttgaagttacttgttactgataataactacatg
atggctgttggtgatgatgatcagtcaatatatggttggcgtggagccgttgttgataat
attcacaaatatgtcgcagatctaaatgatgttgaaatcataaagttagagcaaaactat
cgttcaacgaagaatattcttaaagtagccaattctgtaatcaaaaataatgataataga
atgtcaaaagaactatggtctgctgctgaagatggcgaaaaagtagaagtatattgtgca
gttaatgagcgtgatgaagcgaaatatattatagataaaattcgccagttacatgatggt
ggagtcgattactctgatatagcaattttatatcgctcaaactatttgtcgcgtgtcctt
gaggagagttgtatttatacaagtataccttataggatttatggaggttttcgtttcttt
gatcgagctgaagttaaggatgccttagcatatttaagattagctgttacaagtaatgat
aacttagcatttgagagaattattaatactccaacacgaggaattggcaataaaacttta
gatacaattcgtaatttctcacagattaataatgtgtcatattggcaagccactatagat
attatccagaaagaaattgtgacaaaaagaactgcgtctcttctgttaaagtttatagaa
attataaatgctatttcatcacaaataaaagacttaagtctagataagcttcttgaaact
gtaatcaatgaaagtggtttgttggcatcatatcaagaaaaagatactgaaaaagatcgt
caaaaaattgataacttaaaagagttaataagtgcagctaaagattttgaaccgcagata
gagttacttgatgataatactgatatactacaagattttttgtcttttgcagtgctagaa
gctggtgagatgcaggctgatgaaaatacagatagtgttcagctaatgacaatacatgcg
tcaaaaggtttagaatttcgctatgttttcttagtagcagcagaagaaggagtatttcct
cctagctcgattattaatgctgaagaggcatatactagttcagaatctaaaaaaatccaa
gaaaagctagctgaagagagacgtttattttatgttgccgttacaagagctatgaaagct
ctaaccattagctatgctcaagtgcgtaatatctttggtagaagcagtttccaagtcaaa
tcacgctttctgatggagatagactctgaacatattaatgagggtaaactaactgtagga
tctcaaaataaaccaaagttaaagcaaaaatcaaattttggtgtatctccttttgacttt
cttaagtcaaatgatacaaaaggtaataagttcaaaaagggagataaggtgttccataaa
gtctttggtaaggggatttttgtcaaagcacaatctcaaggttcaaaagagttttatact
gtagactttggtgtagatgtcggtcagaagattttattggcggatattgctaatcttgtt
aaggtctaa
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