Francisella philomiragia O#319-029: BF30_268
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Entry
BF30_268 CDS
T03617
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fpi
Francisella philomiragia O#319-029
Pathway
fpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BF30_268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpi03400
]
BF30_268
Enzymes [BR:
fpi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BF30_268
DNA repair and recombination proteins [BR:
fpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BF30_268
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BF30_268
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BF30_268
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
MIB_arm
ExoI_SH3
Motif
Other DBs
NCBI-ProteinID:
AJI47270
LinkDB
All DBs
Position
complement(262622..264070)
Genome browser
AA seq
482 aa
AA seq
DB search
MFQNQTFLFYDSETTGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPIATI
THHISIAQANTGVSEYQAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNDVLKWPKVLDEEGQPKISLKLENLNTENNLYSGGRAH
DAITDVIVTVELAKKLRIANPKMWQFLLAKFNKQNDENTLAQLDISVEVGGIGYRQAIAV
SGVFGFKNNFMSAILDIGQHRHYKNQEIFLRLDSYDFKDFIEEFGSLEAEHWRLTVNKKW
GDIPLILPAKTRFVGRLPQDRLDLIKTNKEFIRSNQEIFANFVDYVLEYKYPEIENVDID
AAIYQSDFMSAADERGCDKFHTSQIYQKAQMLNQLPKSYYDRAVRIIGRLDFSKLPDKAQ
MEFQDYLNKIVSLDNDELLIDHKGKTRKTLEDIYQEMQDLRMNRDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaatcaaacttttttattttatgactcagaaactactggtattaacaattct
tttgaccaagtattacaatttgctgcgattcgtacagatttggactttaatgaaattgaa
aggtttaatttttttgtgaagctaaatcctgatacaactccatctccaattgcaacgata
acgcatcatatttctattgctcaagcaaatactggtgtgtcagaatatcaggcaattaga
aaaattcataaaatcataaatacaccagggactattagtataggttataatacccttggt
tttgatgatgagtttttgagatttgctttttataaaaatatgctacctccatatagtcat
caatttaaaaatggttgttcaagggctgatttgtttccaatagttacttgctattatttg
ttttgtaatgatgttcttaagtggcctaaagttcttgatgaagaaggacagccaaaaata
tctttgaagttagaaaatttaaatacagaaaataatctctatagtggtggtagagctcat
gatgctattacagatgtaattgttacagtagagttagccaaaaaattaagaatagctaat
cctaaaatgtggcagtttttattggcaaagtttaataagcaaaatgatgaaaatactcta
gctcaactagatatcagtgtagaagttggtggtattgggtatagacaagcaattgcagta
agtggagtttttggctttaaaaataattttatgtcggccatattagatattggtcagcat
aggcattacaaaaatcaagagatatttcttcgcttagatagttatgattttaaagatttt
atagaagagtttggcagtttagaagcagaacattggcgactgactgtaaataaaaaatgg
ggtgatattccgctaatattacctgctaaaacccgttttgtggggaggttgcctcaagat
agactagatttgataaagacgaataaagaatttataagaagcaatcaagaaatatttgct
aattttgttgattatgtattggagtataagtatccagagattgaaaatgttgatatagat
gcagcgatttatcaaagtgactttatgagtgccgctgatgaaaggggttgtgataaattt
catacttcacaaatttatcaaaaagcgcaaatgcttaatcaattaccaaaatcttattat
gacagagctgtcaggataattggtagattagacttttcaaaactacctgataaagcacag
atggaatttcaagattatctaaataagattgttagcctagataatgatgagcttctgatt
gatcataaaggcaaaactcgcaaaacgttggaagatatctatcaagaaatgcaagattta
cgcatgaatcgtgatctaacagaagaacaacaagctttgctatatgagttagaggagtat
ttgttttag
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