Francisella philomiragia O#319-029: BF30_443
Help
Entry
BF30_443 CDS
T03617
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpi
Francisella philomiragia O#319-029
Pathway
fpi03410
Base excision repair
fpi03430
Mismatch repair
fpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BF30_443 (recJ)
03430 Mismatch repair
BF30_443 (recJ)
03440 Homologous recombination
BF30_443 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpi03400
]
BF30_443 (recJ)
DNA repair and recombination proteins [BR:
fpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BF30_443 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BF30_443 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BF30_443 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJI46438
LinkDB
All DBs
Position
448429..450171
Genome browser
AA seq
580 aa
AA seq
DB search
MLIRQKQTNQDILSTLLSKGYDLFLARIISSRVSNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNNEIIGLETDHDCDGQTSHAILYEALTKIFNYPQEKIRSYIGHRMQEGY
GLSESLMNRILTDRIRPNLIITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGAPKSA
IAVLNPTQHDCNYPDKAIAGCMVAWLLMTALRRKYLQNGKSLSKSYGLSNLLDFVAIGTI
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKEKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDELKIEETFENLTKQNNQRKEIQKKLTYEAITKAHQLDNDNNSLCILLD
DGHSGIHGITASRVKEMFGKPVIIFSETQNDPNLISGSARSVDSINIKTILDTIALKSPA
LMIKYGGHKGAAGLTINKSDFDTFYDLFESEIINFIKNNSICLEPILEYDFELDENDFKL
QTLEKIESLEPFGREFEKPLFYNSFTIENLRLVGKDKNHAQLILRYKNIPSIKAIWFNAS
ENKIIEQIAIGDTIKACYELQKEEFLGQTNLSLNIKLIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttaataagacaaaaacaaactaatcaagatatattatctacgctattatcaaaaggt
tatgacttatttttagcacggattatctcttctagagtaagtaattttgagaatattgat
cttatactaaaaggctctataaaagatctatcgtccccctttctcttcaaagatatcgat
aaagccgtagatagactttttcaagcgttacaaaataatgaaatcattggattagaaacc
gaccacgactgtgatgggcaaacatctcatgcaattttatatgaagcactgacaaagata
tttaattaccctcaagaaaagattcgttcatatataggtcacagaatgcaggaaggatat
ggtctgtctgaatctttgatgaatagaatattaacagatcgtattagaccaaatcttatt
ataacggctgacaatggttcaacagatgaacctaggattgcagttcttaaacaaaatgga
atagacaccattgtaacagatcaccatggtattcctcctgagggagcgcctaaaagtgct
atcgccgtactaaaccctactcaacatgattgtaattatccagacaaagctatagctggt
tgtatggttgcttggcttcttatgacagctcttcgtagaaaatatctgcaaaacggtaaa
tcattatctaagtcttatggattaagtaatttacttgattttgttgcaattggtacaatt
gcggactgtgttagtatggcaaatagtcataataaccgtattgttacaaaactaggtata
gagcaacttaagaataacgatcgtctatgttgggacttcttagataaagagaaactatca
agtgagtatattagtttcagtatagctcccttgctaaatagtgatggaagagtttctgat
gcactaggatctgttagctttttacttgaaaatgatgaacttaaaattgaagaaaccttt
gaaaacctaactaagcaaaataaccaacgcaaagaaattcaaaaaaagcttacttatgag
gcgataaccaaagcacatcaattagacaatgataacaactcactatgtatattacttgat
gatggccactctggaattcatggtattacagcaagtagagtcaaagaaatgtttggtaag
cctgtgattattttttctgaaacacaaaatgatcctaacttaatatcaggttctgctagg
agtgtagatagtattaatattaaaacaatacttgatactatagcacttaaatcgcctgct
ttaatgataaaatatggtggtcataaaggtgctgctggcttaacaataaacaaatctgat
ttcgatactttttatgatttatttgaaagtgaaattatcaatttcattaaaaataatagt
atatgtttagagcctattttagagtatgattttgaacttgatgaaaatgatttcaaacta
caaactctagaaaagatagaatctcttgaaccatttggtagagaatttgaaaaaccacta
ttttacaacagttttactatagagaatctacgtttagttggtaaagataaaaatcatgcc
caactaattttacgctataaaaatattccttcaatcaaagctatatggtttaatgcttca
gaaaataaaataattgaacaaatagctattggcgatactataaaagcctgttatgaactt
caaaaagaagaattcctcgggcagacaaacttatctctcaatattaaacttatcgaaaaa
tga
DBGET
integrated database retrieval system
