Francisella philomiragia O#319-029: BF30_528
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Entry
BF30_528 CDS
T03617
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpi
Francisella philomiragia O#319-029
Pathway
fpi03030
DNA replication
fpi03430
Mismatch repair
fpi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BF30_528 (dnaE)
03430 Mismatch repair
BF30_528 (dnaE)
03440 Homologous recombination
BF30_528 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpi03032
]
BF30_528 (dnaE)
03400 DNA repair and recombination proteins [BR:
fpi03400
]
BF30_528 (dnaE)
Enzymes [BR:
fpi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BF30_528 (dnaE)
DNA replication proteins [BR:
fpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BF30_528 (dnaE)
DNA repair and recombination proteins [BR:
fpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BF30_528 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJI48039
LinkDB
All DBs
Position
complement(550396..553875)
Genome browser
AA seq
1159 aa
AA seq
DB search
MFSHLRIHTGYSVVDSTVRLGDLFARAKDKNIVAVALTDVCNLFAAVKFYKQALSNGVKP
IFGVELKIDTEFGVCDLVLLAENNQGYQNIVNLVSKAYQEADRFGSIPLIPKDWLKNINL
ANVICLNGGQNGELGKAILAKDDIRVEEIISESIAIFGRDNYIIEIHKLEYENEGLYNEK
ALELASKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSAD
EMYQTFSELPVLLENTLAIAKRCNVTFDLGKPCLPTVDIPDGLTEREYFSKLCYQGLDKR
LAKILENRPVDKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEEVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAIASINAKRSANETPLDISDIPLDDEKTFKLLQA
GKTIGIFQLESQGMQQIVKDLGTSNFEEIIALVALYRPGPMENIPTFVDRKHGRKQTTYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDAKNMGITVLAPNVNKSVYDCIAASKGTILLGLGAIKGLGGEAIKS
ILNEREASGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDTELERECIVEEWNLRELLINEKKALGMYFSGHII
DDESHWRNHVSFSDLEKIQKPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFDR
ADCLVGEDVFAAVKDNIQVDDVVVVEGKVSYDKQRECNKLSVDKVQPISQYIDENFSKVE
LNLRSQNVNPTNLKKVLDNLKKNIATTDIQRENVLEIKVSLDDVDAKFEYFRKPFSVYEF
VNDISRLIAEGTTVSLSGI
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcatcttcgtatccatacaggatattctgttgttgatagtacagttcgattg
ggtgatctttttgctcgagcaaaagacaaaaatattgttgcagtagcattaacggacgta
tgcaatttattcgctgcagttaagttttacaagcaagctttatcaaatggagttaaacct
atctttggcgtagagctaaagattgatacagagtttggtgtctgtgacttagtactatta
gcagaaaataatcaaggctatcaaaatattgtcaatttagtttcaaaagcatatcaagag
gctgataggtttggttcaataccattaatccctaaagactggctaaaaaatataaatttg
gcaaacgtcatctgtctaaatggtggtcagaatggagagcttggcaaagctattttagct
aaggacgatatcagggttgaagaaattattagtgaaagtatcgcaatttttggtagagac
aattatattatcgaaattcacaaacttgagtatgaaaatgagggcttatataacgagaaa
gcgcttgaacttgcgagtaagcataatctcatagcagtagcgacaaatttgacagtgttt
atggagtcagatgattatgatatccatgaaatcagagcttgtatcaatgaaaaaacgaca
atccttgatgagtcgcgcaaatctaaatttacaagagagcaatatctaaaatcagctgat
gaaatgtatcaaactttctcagagttaccagtattgttagagaatactttagcaatagca
aaacgctgtaatgtaacatttgatttaggtaaaccatgtttgccaacggttgatattcca
gatggtttaacagagagagagtacttttcaaagctatgctatcaaggtttagataaacgt
ttagcaaaaattctagaaaacagaccagttgataaacatgagcatattataaaagtttac
aaagatagactgcaacgagagatcgatattatctgcgatatgggctttcctggttatttc
ttgatagttgaagatttcattagatggtcaaaagagaatgatatcccagtaggtccaggg
cgtggttctggtgctggttcattagtagcttattcattgcttattaccgatattgatcct
ttaccgtatgggttactttttgagagatttctaaatcctgaaagggtatctatgcctgat
tttgatattgatttctgtatccaaggtagagatagagttatcaaatatgtagagcagaaa
tatggtaagcaaagtgttgggcaaattatcacctacggtactatggcagctaaaggtgta
gtgcgagatgtagtacgtgtaatggggcagagttttggtttcggagataggattgctaag
ctaataccagaaacaccaggtactacatttaaaaaaatcttgcatgaaggtgaacctcta
tatgatgaaatgcaggcagatgaagaagttgctgagattgttgaaaaagcccaaaaatta
gaaggtctaccacgaagcctgggcaaacatgccgcaggtattgtgatatcgccaacggtg
atatcagattttgcacctgtatattgtgaagataaaggtggagatatagttacccaattt
gataagggcgatgttgaagatgttggtcttgttaagtttgacttcttggggctaaagaac
ttaacaattatcaaaaatgctattgcaagcatcaatgctaagagatcagctaatgaaacg
cctctagatatttctgatattcctcttgatgatgagaaaacatttaaactactacaagct
ggtaaaactattggtatatttcaactagagtcacaaggtatgcaacagattgtcaaagat
cttggcacatcaaactttgaggagattatcgccttagtagcactatatcgtcctggtccg
atggagaatatcccaacattcgtagatcgcaaacatggcagaaagcaaactacttactta
catccattattagaagaagtgcttagagagacttatggtataccagtttatcaagagcag
gtaatgcaaatggcgcagaagctagctggttatactttaggcggagcagatttgttgcgt
cgtgcgatgggtaagaaaaagccagaagagatggagcaacagcgtaaaatcttcaaagag
ggtgccgctaaatatcacaatattgaagctggacttgctgatgagatatttgaccaaatg
gaagcctttgctggctatggtttcaacaaatctcatgctgcggcttacgcgttgattgct
tatcaaactgcttggttaaaagctcattatcctgatgaatatatggctgctcttatgtca
ggagatatgggtaatacagatcagttggttaaatttattttagatgctaagaatatgggt
ataacagtcttagcaccaaatgtaaataagagtgtctatgattgtattgcagcttcaaaa
ggaacgattttattgggtctaggtgctatcaaaggtcttggtggtgaggctatcaagagt
atacttaatgagcgagaagcttcaggggagtttagttctatttttgacttaactcgtaga
gtagacttgcgtaaggttaataaaaaagcactcgaagccttatgttttgcaggagctatc
aaggatatatctaaaaatagagcaacagcttttaactctatcgaaaaagctatcaaaaac
gctggttatgtgaatgaaatggctgctgctgggcaaaatgatttattcggtttcacagaa
caagagagtgatactgatacagagcttgaaagagaatgtattgtagaggagtggaatctt
agagagcttttgattaatgagaaaaaagcattaggaatgtatttctcagggcatattatt
gatgatgaaagtcattggcgtaatcatgttagctttagtgatcttgagaaaatccaaaaa
ccaaatatggatggtaattctgtaagaattattgcaagtatgataacaccaccagctaga
cgaaaaactaaaactggtagagttctgtatattattaatattgatgatgaatttgataga
gcagattgtctagttggtgaagatgtatttgctgcagttaaggataatatccaagttgat
gatgtggttgtagtagagggtaaagttagctatgataaacaacgagagtgcaataaacta
agtgttgataaggtacaaccgatatcacaatatattgatgagaattttagtaaagttgag
ttgaatcttagaagtcaaaatgtaaaccctacaaacctaaaaaaagtattagataacctc
aagaaaaatatagctactactgatattcaaagagaaaatgtcttagaaataaaagtatct
ctagatgatgttgatgctaagtttgaatattttcgaaagccattctcggtgtatgagttt
gttaatgatattagtaggctaatagctgagggtactactgttagtttgagtgggatttaa
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