Francisella philomiragia GA01-2801: LA02_1202
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Entry
LA02_1202 CDS
T03621
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fpj
Francisella philomiragia GA01-2801
Pathway
fpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LA02_1202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpj03400
]
LA02_1202
Enzymes [BR:
fpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LA02_1202
DNA repair and recombination proteins [BR:
fpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LA02_1202
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA02_1202
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA02_1202
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
MIB_arm
ExoI_C
ExoI_SH3
Motif
Other DBs
NCBI-ProteinID:
AJI57138
LinkDB
All DBs
Position
1168241..1169689
Genome browser
AA seq
482 aa
AA seq
DB search
MFQNQTFLFYDLETTGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPIATI
THHISIAQANTGVSEYQAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNDVLKWPKVLDEEGHQKISLKLENLNTENNLYSGGRAH
DAITDVIVTVELAKKLRIANPKMWQFLLAKFNKQNDENTLAQLDIGVEVGGIGYRQAIAV
SGVFGFKNNFMSAILDIGQHRHYKNQEIFLRLDSYDFKDFIEEFGSLEAEHWRLTVNKKW
GDIPLILPAKTRFVGRLPQDRLDLIKTNKEFIRSNPEIFANFVDYVLEYKYPEIENVDID
AAIYQSDFMSVADERGCDKFHTSQIYQKAQMLNQLPKPYYDRAVRIIGRLDFSKLPDKAQ
MEFQDYLNKIVSLDNDELLIDHKGKTRKTLEDIYQEMQDLHMNRDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaatcaaacttttttattttatgacttggaaactactggtattaacaattct
tttgaccaagtattacaatttgctgcgattcgtacagatttggactttaatgaaattgaa
aggtttaatttttttgtgaagctaaatcctgatacaactccatctccaattgcaacgata
acgcatcatatttctattgctcaagcaaatactggtgtgtcagagtatcaggcaattagg
aaaattcataaaatcataaatacaccagggaccattagtataggttataatacccttggt
tttgatgatgagtttttgagatttgctttttataaaaatatgctacctccatatagtcat
caatttaaaaatggttgttcaagggctgatttgtttccaatagttacttgctattatttg
ttttgtaatgatgttcttaagtggcctaaagttcttgatgaagaaggacaccagaaaata
tctttgaagttagaaaatttaaatacagaaaataatctctatagtggtggtagagctcat
gatgctattacagatgtaattgtcacagtagagttagccaaaaaattaagaatagctaat
cctaaaatgtggcagtttttattggcaaagtttaataagcaaaatgatgaaaatactcta
gctcaactagatatcggtgtagaagttggaggtattgggtatagacaagcaattgctgta
agtggagtttttggctttaaaaataattttatgtcagccatattagatattggtcagcat
agacactataaaaatcaagagatatttcttcgcttagatagttatgattttaaagatttt
atagaagagtttggcagtttagaagcagaacattggcgactgactgtaaataagaaatgg
ggtgatattccgctaatattacctgctaaaacccgttttgtggggaggttgcctcaagat
agactagatttgataaagacgaacaaagaatttataagaagcaatccagaaatatttgct
aattttgttgattatgtattggaatataagtatccagagattgaaaatgttgatatagat
gcagcgatttatcaaagtgactttatgagtgtcgctgatgaaaggggttgtgataaattt
catacttcacaaatttatcaaaaagcgcaaatgcttaatcaattaccaaaaccttattat
gacagagctgtcaggataattggtagattagacttttcaaaactacctgataaagcccaa
atggagtttcaagattatctaaataagattgttagcctagataatgatgagcttttgatt
gatcataaaggcaaaactcgcaaaactttggaagatatctatcaagaaatgcaagattta
cacatgaatcgtgatctaacagaagagcaacaagctttgctatatgagttagaggagtat
ttattttag
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