Francisella philomiragia GA01-2801: LA02_1205
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Entry
LA02_1205 CDS
T03621
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
fpj
Francisella philomiragia GA01-2801
Pathway
fpj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA02_1205 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpj03400
]
LA02_1205 (uvrB)
DNA repair and recombination proteins [BR:
fpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA02_1205 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA02_1205 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
eIF3_p135
SWI2_SNF2
Microtub_bd
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJI57134
LinkDB
All DBs
Position
1173979..1175985
Genome browser
AA seq
668 aa
AA seq
DB search
MNKFNLVTKYAPAGDQPNAIKSLVEGINNGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
IVAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDVFPADSEKDAIRVEFFDDEIEAISVIDSLTSKKIKTLHRA
TIFPSTHYVASKERKDIVIEEIKAELKERVKYFEEEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGDPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFNEFESLLPQTIYVSATPANYELEKSQNTVEQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAKEERILITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRQLQDEHNKKNNITPKTIIKSIDDMLDSSPE
MQKRAYKNNSRLKVDDVDVSAILGMTEASKVIKALEKRMRAYAKELEFEQATAIRDKITE
IKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcaacctagtaacaaagtatgctccagctggagatcagccaaatgcaatt
aaatccttagttgaaggtattaataatgggttacagcatcaggttttgctaggagttaca
ggttctggtaaaacatatactatggcaaatgtgattcaacaaacacaaaaaccatgtttg
attgttgcacataacaaaactttagcagctcaattatattcagagtttaagcaatatttc
ccagataatgcagttgagtattttgtatcatattacgattattatcaaccagaagcgtat
gttgcagcttctgatacttatatagaaaaagattcatctgtaaatgagcatattgaacaa
atgcgtttgtcagctacaaaagcaatacttgagcgtaatgatgtaattatagttgcaacc
gtatcagctatttatggtctaggcgatcctgagcaatatatgcagatgcttttgcaccta
aaagtaggtgaagagctagggctaaaaaaagctcaaactaagttagtagagatgcaatat
tcgcgtaatgatatggatttcagtcgtggtagttttcgagttaggggagaagtattagat
gtattcccagcagactcagagaaagatgctattcgagtagagttttttgatgatgagatt
gaagcgataagtgtgatcgattcattaacttccaaaaaaattaaaacattacacagagca
acaatattcccaagtacacattatgttgcatcaaaagagcgcaaagatatagttatagaa
gagatcaaagcagaacttaaagaaagagttaaatattttgaggaagaaggtaaactcctt
gaagctcaaagaatagaacaacgtactaagtatgatattgaaatgattcaagagcttggc
tactgtacaggcatcgaaaattattcaagattgttatcaggtagagctcctggtgatcca
ccaccaacattgattgactacttaccagaaaatgccttagtcatagttgatgagtcgcac
gtgacattaccacagtttggtggaatgtataaaggagatttatctcgtaaatcaaatctc
gttaactatggtttcagattgccttctgccttggataatagacctctgaaatttaatgag
tttgagagtctactgcctcagacaatatatgtatccgcgacacccgctaattatgaactt
gaaaagtctcaaaatactgtagagcaggtaattagaccaactggtttattagatcctgaa
gtctttgtaagaccggtagctatacaagtagaagatgctttatcagagataaataaagct
atagccaaagaagaaagaatcttgataacaactttaaccaaaaaaatggcagagaactta
acggagtatctatctgaacatggcgttaatgtcagatatctacattctgatattgatact
gttgagagagtccaaattattcatgatttgcgtcatggtgtatttgatgtgcttgtaggt
attaaccttcttagagaggggcttgatatgccggaggttggagttttattaatttttgat
gctgataaagaagggtttttgcgttctgaaaaatctcttattcaaactattggacgtgtg
gctagaaaccaaaatggtagagctattttatatgcagatgttgttacaaaatctatgaaa
aaggctatggatgaaactctacgtcgtcgtcaacttcaagatgaacataataagaaaaac
aatattacgcctaaaacaatcatcaaaagtatagatgatatgttagatagttctccagag
atgcaaaaacgtgcatataaaaataattcgcgcttaaaggttgatgatgtagatgtttcg
gctatactaggtatgactgaagcttcgaaggttattaaagctctagaaaaacgaatgaga
gcttatgcaaaagagcttgaattcgagcaggcaacagcaattagagataagataactgaa
ataaagcagaagtttattaatttataa
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