Francisella philomiragia GA01-2801: LA02_1596
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Entry
LA02_1596 CDS
T03621
Name
(GenBank) HRDC domain protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fpj
Francisella philomiragia GA01-2801
Brite
KEGG Orthology (KO) [BR:
fpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpj03016
]
LA02_1596
Enzymes [BR:
fpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LA02_1596
Transfer RNA biogenesis [BR:
fpj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LA02_1596
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Nop5_56-rel_N_Arc
Mrx7
DNA_polI_exo1
DUF3683
Motif
Other DBs
NCBI-ProteinID:
AJI58099
LinkDB
All DBs
Position
1552199..1553293
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AA seq
364 aa
AA seq
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MIINTNKQLNNVIEILKSTSQIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLEDLDF
SKLKDIFEDTNIQKIIHSATNDIPIIKRFFDCEVNNIFDTQLAASFLGTQSQISLKALLK
DILDIEIEKESQFSDWRKRPLSQKQFDYALKDVEHLIEIKYHLESKLNQTDYKQYFYEEL
LDIQKTEFNTVENIHNKIGNIQKFSEKTQKNAILVAQWRESMAQQKNIPVRFIFDNKILY
AIAHKNPKSLNSFDTEELKKLKPWIKKSIITVINSKQNLEHINLEQKSGAKISTEINDKI
TTFFDNETRNFKFDTSLIASRKDIRSVAYNLSIDPNYSGNKLLVGWRYEIVGKNLKEYIL
DIIK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgataattaatacaaataaacaattaaataacgtgattgaaattcttaaaagcacttca
caaatagctgtagatacagaattttactggatgcgtacatattacccagagctttgtctt
gtacaaatagctactgaaaatgaaatctttttgatagatactcttgaagatcttgatttt
agtaaactcaaagatatttttgaggatacgaatatccaaaaaataatccattctgcaaca
aatgatatcccaattataaaaagattttttgattgtgaagttaataatatttttgatact
cagcttgcagcttcatttttaggtactcaatcgcaaatatctctcaaggctctactcaaa
gatatacttgatattgaaatagagaaagaatctcagttttcagactggcgtaaaaggcca
ctttctcaaaagcagtttgactatgctctaaaagatgttgagcatcttatagaaatcaaa
tatcatcttgaatcaaaacttaatcaaactgattacaagcaatacttctatgaagaacta
ttagatatacaaaaaacagaatttaacactgttgagaatattcacaataaaattggtaat
atccaaaaatttagtgaaaaaacacaaaaaaatgctatattagtagctcaatggcgtgaa
tctatggctcaacaaaaaaacattcctgttagatttatttttgataataaaattctttat
gctatagctcataaaaatcctaagtctttaaactcatttgatactgaagagctaaaaaaa
cttaagccttggatcaaaaaaagtataataacagttattaactctaaacagaatctagaa
catataaacttagagcaaaaatctggagctaaaatctccaccgagataaatgacaaaata
actactttttttgataatgaaacaagaaacttcaaattcgatacttcactaatagcatca
agaaaagatatccgttcagtagcatataatcttagtatcgaccctaactactcgggtaat
aagctattagttggttggagatatgaaatagttggtaaaaatttaaaagagtatatactt
gatatcataaaataa
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