Francisella philomiragia GA01-2801: LA02_1965
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Entry
LA02_1965 CDS
T03621
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpj
Francisella philomiragia GA01-2801
Pathway
fpj03030
DNA replication
fpj03430
Mismatch repair
fpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA02_1965 (dnaE)
03430 Mismatch repair
LA02_1965 (dnaE)
03440 Homologous recombination
LA02_1965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpj03032
]
LA02_1965 (dnaE)
03400 DNA repair and recombination proteins [BR:
fpj03400
]
LA02_1965 (dnaE)
Enzymes [BR:
fpj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA02_1965 (dnaE)
DNA replication proteins [BR:
fpj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA02_1965 (dnaE)
DNA repair and recombination proteins [BR:
fpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA02_1965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJI57530
LinkDB
All DBs
Position
complement(1957820..1961299)
Genome browser
AA seq
1159 aa
AA seq
DB search
MFSHLRIHTGYSVVDSTVRLGDLFARAKDKNIVAVALTDVCNLFAAVKFYKQALSNGVKP
IFGVELKIDTEFGVCDLVLLAENNQGYQNIVNLVSKAYQEADRFGSIPLIPKDWLKNINL
ANVICLNGGQNGELGKAILAKDDIRVEEIISENIAIFGRDNYIIEIHKLEYENEGLYNEK
ALELASKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSAD
EMYQTFSELPVLLENTLAIAKRCNVTFDLGKPCLPTVDIPDGLTEREYFSKLCYQGLDKR
LAKILENRPADKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEEVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAIASINAKRSANETPLDISDIPLDDDKTFKLLQA
GKTIGIFQLESQGMQQIVKDLGTSNFEEIIALVALYRPGPMENIPTFVDRKHGRKQTIYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDAKNMGITVLAPNVNKSVYDCIAASKGTILLGLGAIKGLGGEAIKS
ILNEREASGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDTELERECIVEEWNLRELLINEKKALGMYFSGHII
DGESHWRNHVSFSDLEKIQKPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFDR
ADCLVGEDVFAAVKDNIQVDDVVVVEGKVSRDNQRECNKLSVDKVQPISQYIDENFSKVE
LNLRSQKVNPTNLKKVLDNLKKNIATTDIQRENVLEIKVSLDDVDAKFEYFRKPFSVYEF
VNDISRLIAEGTTVSLGGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcatcttcgtatccatacaggatattctgttgttgatagtacagttcgattg
ggtgatctttttgctcgagcaaaagacaaaaatattgttgcagtagcattaacggacgta
tgtaatttattcgctgcggttaaattttataagcaagctttatcaaatggagttaaacct
atctttggcgtagagctaaagattgatacagagtttggtgtatgtgacttagtactatta
gcagaaaataatcaaggctatcaaaatattgtcaatttagtttcaaaagcatatcaggag
gctgataggtttggttcaataccattaatccctaaagactggctaaaaaatataaatttg
gcaaatgtcatctgtctaaatggtggtcagaatggagagcttggcaaagctattttagct
aaggacgatatcagggttgaagaaattattagtgaaaatatcgcaatttttggtagagat
aattatattatcgaaattcacaaacttgagtatgaaaatgagggcttatataacgagaaa
gcgcttgaacttgcgagtaagcataatctcatagcagtagcgacaaatttgacagtgttt
atggagtcagatgattatgatatccatgaaatcagagcttgtatcaatgaaaaaacgaca
atccttgatgagtcgcgcaaatctaaatttacaagagagcaatatctaaaatcagctgat
gaaatgtatcaaactttctcagagttaccagtattgttagagaatactttagcaatagca
aaacgctgtaatgtaacatttgatttgggtaaaccatgtttgccaacggttgatattcca
gatggtttaacagagagagagtacttttcaaagctatgctatcaaggtttagataaacgt
ttagcaaaaattctagaaaatagaccagctgataaacatgagcatattataaaagtttac
aaagatagactgcaacgagagatcgatattatctgcgatatgggctttcctggttatttc
ttgatagttgaagatttcattagatggtcaaaagagaatgatatcccagtaggtccaggg
cgtggttctggtgctggttcattagtagcttattcattgcttattaccgatattgatcct
ttaccgtatgggttactttttgagagatttctaaatcctgaaagggtgtcgatgcccgat
tttgatattgatttctgtatccaaggtagagatagagttatcaaatatgtagagcaaaaa
tatggtaagcaaagtgttgggcaaattatcacctacggtactatggcagctaaaggtgta
gtgcgagatgtagtacgtgtaatggggcagagttttggtttcggagataggattgctaag
ctaataccagaaacaccaggtactacatttaaaaaaatcttgcatgaaggtgaacctcta
tatgatgaaatgcaggcagatgaagaagttgctgagattgttgaaaaagcccaaaaatta
gaaggtctaccacgaagcctgggcaaacatgccgcaggtattgtgatatcgccaacggtg
atatcagattttgctccagtatattgtgaagataaaggtggagatatagttacccaattt
gataagggcgatgttgaagatgttggtcttgttaagtttgatttcttgggactgaaaaac
ttaacaattatcaaaaatgctattgcaagcatcaatgctaagagatcagctaatgaaacg
cctctagatatttctgatattcctcttgatgatgataaaacatttaaactactacaagcg
ggtaaaactattggtatatttcaactagagtcacaagggatgcaacagattgtcaaagat
cttggcacatcaaactttgaggagattatcgccttagtagcactatatcgtcctggtccg
atggagaatatcccaacatttgtagatcgcaaacatggcagaaagcaaactatctactta
catccattattagaagaagtgcttagagagacttatggtataccagtttatcaagagcag
gtaatgcaaatggcgcagaagctagctggttatactcttggtggagcagatttgttgcgt
cgtgcgatgggtaagaaaaagccagaagagatggagcaacagcgtaaaatcttcaaagag
ggtgccgctaaatatcataatatcgaagctggacttgctgatgagatatttgaccaaatg
gaagcctttgctggctatggtttcaacaaatctcatgctgcggcttacgcgttgattgct
tatcaaactgcttggttaaaagctcattatcctgatgagtatatggcagctcttatgtca
ggggatatgggcaataccgatcagttggttaaatttattttagatgctaagaatatgggt
ataacagttttagcaccaaatgtaaataagagtgtctatgattgtattgcagcttcaaaa
ggaacgattttattgggtctaggtgctatcaaaggtcttggtggtgaggctatcaagagt
atacttaatgagcgagaagcttcaggagagtttagctctatttttgacttaactcgtaga
gtggacttgcgtaaggttaataaaaaagcactagaagccttatgttttgcaggagctatt
aaggatatctctaaaaatagagcaacagcttttaactctatcgaaaaagctatcaaaaac
gctggttatgtgaatgaaatggctgctgcagggcaaaatgatttatttggtttcacagaa
caagagagtgatactgatacagagcttgaaagagaatgtattgtagaggagtggaatctt
agagagcttttgattaatgagaaaaaagcattaggaatgtatttctcagggcatattatt
gatggtgaaagtcattggcgtaatcatgttagctttagtgatcttgagaaaatccaaaaa
ccaaatatggatggtaattctgtaagaattattgcaagtatgataacaccaccagctaga
cgaaaaactaaaactggtagagttctgtatattattaatattgatgatgaatttgataga
gcagattgtctagttggtgaagatgtatttgctgcagttaaggataatatccaagttgat
gatgtggttgtagtagagggtaaagttagccgtgataatcaaagagagtgcaataaacta
agtgttgataaggtacaaccgatatcacaatatattgatgagaattttagtaaagttgag
ctgaatcttagaagtcaaaaggtaaaccctacaaacctaaaaaaagtattagataacctc
aagaaaaatatagctactactgatattcaaagagaaaatgtcttagaaataaaagtatct
ctagatgatgttgatgctaagtttgaatattttcgaaagcccttctcggtgtatgagttt
gttaatgatattagtaggttaatagcggagggtactactgttagtttgggtggggtttaa
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