Francisella philomiragia GA01-2801: LA02_584
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Entry
LA02_584 CDS
T03621
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fpj
Francisella philomiragia GA01-2801
Brite
KEGG Orthology (KO) [BR:
fpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpj03016
]
LA02_584
Enzymes [BR:
fpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LA02_584
Transfer RNA biogenesis [BR:
fpj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LA02_584
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
MT-A70
FAD_syn
Motif
Other DBs
NCBI-ProteinID:
AJI56237
LinkDB
All DBs
Position
548228..550102
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AA seq
624 aa
AA seq
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MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPAKNVQILTVVENDFDLD
KLEKLEIPELELTWELLQEQQQTSIDELSELLFESVGANQAYTVWLLASDGEYFSFNDDF
SINIHSQEQKNQIVSDKQEKLRKEQELNDFIERLNNKTFNVEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPHLYRYGAELESNPAEFKYNSGSDSQRVD
LTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYV
PEHIITMLPPQATQKLGLGLQEVSPALSVGFRLDESGDIHDIEICFSNIKVTRYSYEFVE
ENISALKLGDIEVYTKYFTDKRLAKGAVELDFPEIKISLDNDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLEQDDLENIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMIGIEDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQAAVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEEN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcatcaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aaattacccgcaaaaaatgtccaaatactcacagttgtagaaaatgatttcgatttggat
aaacttgagaaattagaaattcctgagttggagttaacatgggagttattacaagagcaa
caacaaacatcaattgatgagttaagtgagcttctttttgaatccgtaggagctaatcaa
gcttatactgtatggcttttggcttcagatggagagtattttagctttaatgatgacttt
agtatcaatattcattcacaagagcaaaaaaatcaaatagttagcgataaacaagagaag
ctcagaaaagaacaagaactaaatgatttcatagagcgtcttaataataagacttttaat
gttgaagacacaaagttccttaaagagatagaggctttagcaacacttaaaagtacaaag
tgtcgtttctttaaatacttaaatatggaagagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattctttaatcctcatttatatcgatatggtgccgag
ttagaaagtaatcctgcggaatttaaatataactctgggtcagatagtcagcgtgtagat
ctaacgcatctgactgcttatgctatagatgatgagggtagtaatgaccctgatgatgcg
ataagttgggatgctcaacaaaataaaatgtgggttcatatagctgatccatcgtctagt
attagttttggcgatgaagtagatcttgaggctagagcgcgaggttctaacttatatgtg
ccagagcatataattacgatgttgccacctcaagcaacacaaaagttaggtttaggccta
caagaagtatctccagctttgtcagtaggatttagacttgatgagtcaggtgatattcat
gatattgagatatgttttagtaacataaaagttactagatattcttatgagttcgttgaa
gaaaatatctccgctctaaaacttggagacatagaggtttatactaaatatttcactgat
aagcgtttagcaaagggagcggtagaacttgattttcctgagataaaaatatcattagat
aatgataagaatgtcaaactaactgacttaccacgtttaaactcaagaacattggtacgt
gatactatgctgatggctggagttgcgattggacagttttgtaaagaaaataatatttgt
gtacctttttcgacacagccagagcatgatcttgagcaagatgatttagagaatattgac
tcgatagccgatatgtttgcaacacgtaaaaagctccaaagaggtaaatactctacagaa
cctgatgttcacgcaggtatgggtttagattcttatgtacaagtgacaagccctctaaga
agatatttagatttacttgttcattatcaattacgcaatttcttagaaaataagcaaatg
attggtattgaggatgttgataatataatcgctcaagtagatattcctattaagtcaaat
aggcaaacggagcgtttttctaattctcattggaaattagtctatctaatgcagaatcct
aatttagagttccaagcagcagtcattgaaaaattagataaaggtcgtttaatggtttct
atcgcagatttagcgatgactaaaaaacttgctgttagtggtaagtacgacttaaatgat
caaataaaattacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagaattaa
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