Francisella philomiragia GA01-2801: LA02_669
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Entry
LA02_669 CDS
T03621
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpj
Francisella philomiragia GA01-2801
Pathway
fpj03420
Nucleotide excision repair
fpj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA02_669 (uvrD)
03430 Mismatch repair
LA02_669 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpj03400
]
LA02_669 (uvrD)
Enzymes [BR:
fpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA02_669 (uvrD)
DNA repair and recombination proteins [BR:
fpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA02_669 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LA02_669 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
AAA_11
DEAD
DUF4252
Motif
Other DBs
NCBI-ProteinID:
AJI57937
LinkDB
All DBs
Position
638473..640701
Genome browser
AA seq
742 aa
AA seq
DB search
MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDINYAHIYTAYEERLLL
DNALDFADLLLYLYELFSLNQQLREYYQSLFKYILIDEFQDTNQVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAIVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDVGVDYSDMAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGNKTL
DIIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLET
VINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSAESKKIQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTVG
SQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKVQSQGSKEFYT
VDFGVDVGQKILLADIANLVKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagactttctttcagggttaaatccccaacaaaaaaaagcgaccttgcta
gaggatcgtaattctttgatacttgctggagccggtagtggcaaaacaaaagttttaact
tctcgtatagcttatctttgtcgtgataaaggagtatctgttgaaaatattctggctgta
acattcacaaacaaagcagctaaagaaatccaacatcgagttgagaaaatgcttggtatt
tcaacttttggtatgtggataggtacttttcacggtattgctcatagattattacgtaag
catgctcatgagttgggcttagataagaactttaggattcttgatcaagatgagcaagct
caattaatcaaaaaagtaattaagagtttggatcttgatgacaaaaaatatccaccaaaa
ttactgcaaaactttattaataaacaaaaagataaggctgttcgtagtaacaaattaaca
aagcagtatgatattaattatgctcatatttatactgcttatgaagagaggttactgtta
gataatgctttagattttgccgacttacttttgtatttatatgaattgttttctcttaac
caacagcttagagaatactatcagagtttattcaagtatattttgatagacgagtttcag
gatactaaccaagtccaatatatgtggttgaagttacttgttacagataataactacatg
atggctgttggtgatgatgatcagtcaatatatggttggcgtggagccattgttgataat
attcacaaatatgtcgcagatctaaatgatgttgaaatcataaagttagagcaaaattat
cgttcaacgaagaatattcttaaagtagccaattctgtaatcaaaaataatgataataga
atgtcaaaagaactatggtctgctgctgaagatggcgaaaaagttgaagtatattgtgca
gttaatgagcgggatgaagctaaatatattatagataaaattcgccagttacatgatgtt
ggagtcgattactctgatatggcaattttatatcgctcaaactacttgtcgcgtgtcctt
gaggagagttgtatttatgcaagtataccttataggatttatggaggttttcgtttcttt
gatcgagctgaagttaaggatgccttagcatatttaagattagctgttacaagtaatgat
aacttagcatttgagagaattattaatactccaacacgaggaattggcaataaaacttta
gatataattcgtaatttctcacagattaataatgtgtcatattggcaagccactatagat
attatccagaaagaaattgtgacaaaaagaactgcgtctcttctgttaaagtttatagaa
attataaatgctatttcatcacaaataaaagacttaagtctagataagcttcttgaaact
gtaatcaatgaaagtggtttgttggcatcatatcaagaaaaagatactgaaaaagatcgt
caaaaaattgataacttaaaagagttaataagtgcagctaaagattttgaaccgcagata
gagttacttgatgataatactgatatactacaagattttttgtcttttgcagtgctagaa
gctggtgagatgcaggctgatgaaaatacagatagtgttcagctaatgacaatacatgcg
tcaaaaggtttagaatttcgctatgttttcttagtagcagcagaagaaggagtatttcct
cctagctcgattattaatgctgaagaggcatatactagtgcagaatctaaaaaaatccaa
gaaaagctagctgaagagagacgtttattttatgttgctgttacaagagctatgaaggct
ctaaccattagctatgctcaagtgcgtaatatcttcggtagaagcagtttccaagtcaaa
tcacgctttctgatggaaatagactctgaacatattaatgagggtaaactaactgtagga
tctcaaaataaaccaaagttaaagcaaaaatcaaattttggtgtatctccttttgacttt
cttaagtcaaatgatacaaaaggtaataagttcaaaaagggagataaggtgttccataaa
gtctttggtaaggggatttttgtcaaagtacaatctcaaggctcaaaagagttttatact
gtagactttggtgtagatgtcggtcagaagattttattggcggatattgctaatcttgtt
aaggtctaa
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