Flavobacterium psychrophilum v4-33: IA06_00465
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Entry
IA06_00465 CDS
T03661
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fpk
Flavobacterium psychrophilum v4-33
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpk03400
]
IA06_00465
DNA repair and recombination proteins [BR:
fpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IA06_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
Lon_C
AAA
AAA_22
AAA_24
AAA_5
AAA_16
CobU
AAA_14
NTPase_1
AAA_18
GvpD_P-loop
ABC_tran
TniB
NACHT
Isochorismatase
MCM
nSTAND3
RsgA_GTPase
SLFN-g3_helicase
HypA
DZR
Motif
Other DBs
NCBI-ProteinID:
AIG40380
UniProt:
A0A076NSD5
LinkDB
All DBs
Position
complement(106524..107885)
Genome browser
AA seq
453 aa
AA seq
DB search
MAKVKTSFFCQSCGSQYSKWQGQCNACKEWNTIVEEIIQKEEKVAWKAETSEVKKASKPL
LVKEIDSTQEIRMNTCDGELNRVLGGGIVPGSLILLGGEPGIGKSTLLLQISLKLPYKTL
YVSGEESQKQIKMRAERITTNGDNCYILTETKTQNIFRQIQEIEPEIVIIDSIQTLHTDY
IESSPGSISQIRETTAELIKFAKETNVPVILIGHITKDGSIAGPKILEHMVDTVLQFEGD
RNHVYRILRSLKNRFGSTAELGIYEMQGSGLREVSNPSEILISHKNEELSGTAIASTLEG
MRPLMIEIQALVSTAVYGTPQRSTTGYNAKRLNMILAVLEKRAGFRLGAKDVFLNITGGI
SVDDPAIDLAVVAAILSSNEDIPINKDFCFAGEVGLSGEIRPVNRVDQRIQEAEKLGFST
IYVSKYNKISLKNTGIKIQLVAKIEDIVSELFG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtaaaaacatcttttttttgccaaagttgcggctcacaatactctaaatgg
caaggacaatgcaacgcttgcaaagaatggaacaccattgttgaagaaattattcaaaaa
gaagaaaaagtagcttggaaagccgaaacatcggaagtaaaaaaagcttctaaaccactt
ttagtaaaagaaatagacagcacacaagaaatccgaatgaacacttgcgatggcgaacta
aatcgagtacttggtggtggcatagttcctggatcattaatactcttaggaggagaaccc
ggcattggaaaaagtacgcttttacttcaaatttcgttaaaattaccctacaaaacctta
tatgtttcaggcgaagaaagtcagaagcaaataaaaatgcgtgccgaaagaattaccaca
aacggcgacaattgttacatattaacagaaaccaaaactcaaaatatatttcgacaaatt
caggaaatagaacctgaaattgtcattatagattcgattcaaacattgcatacagattat
atcgagtcttcgcctggaagtatttctcaaattcgagaaaccactgccgaactcataaaa
tttgccaaagaaaccaatgttcccgttatcctaattggtcatattaccaaagacggaagc
attgctggacctaaaattttggaacacatggtggatactgttttacaatttgaaggagat
agaaaccacgtgtatcggattcttcggtcgttaaaaaatcgttttggttctactgccgaa
ctcggtatttacgaaatgcaaggttccggattgcgagaagtttctaatccatcagaaata
ttgatatcgcacaaaaacgaagaattatccggaacagcaattgcttcaacgctagaggga
atgcggccactgatgatagaaattcaagcattagtatctaccgctgtttacggaacaccg
caacgaagcaccacaggctacaatgccaaacgactcaatatgattctcgctgttctcgaa
aaaagagccggatttcgtttgggagctaaagatgttttcctaaatattactggcggaatt
tcggtagatgatcctgcgatagatttagctgtggttgctgctatattatcatctaacgaa
gatattcctattaataaagatttttgttttgcaggcgaagtaggactttcgggcgaaatt
cgtccggtaaatcgcgtcgaccaacgcattcaagaagcagaaaaattaggtttttcgacc
atttacgtatctaaatacaataaaatttcattaaaaaacactggaatcaaaatacaatta
gttgcaaaaattgaagatattgtaagtgaattgtttgggtaa
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