Flavobacterium psychrophilum v4-33: IA06_02295
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Entry
IA06_02295 CDS
T03661
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fpk
Flavobacterium psychrophilum v4-33
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpk03021
]
IA06_02295
03009 Ribosome biogenesis [BR:
fpk03009
]
IA06_02295
Transcription machinery [BR:
fpk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IA06_02295
Ribosome biogenesis [BR:
fpk03009
]
Prokaryotic type
rRNA transcription factors
IA06_02295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIG40710
UniProt:
A0A075S476
LinkDB
All DBs
Position
518982..520223
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AA seq
413 aa
AA seq
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MENLALIDSFSEFKDDKSIDRPTLMAILEDVFRNALKKKYGSDDNFDIIINPDKGDMEIW
QRRVIVADDDLDLDHLEITLTDARKIEPDFEIGEEVSEEVKLIDLGRRAILALRQNLISK
IHEHDNTNLYKQFKDLIGDIYTGEVHHVRPRVVILVDDEGNEIILPKEKQIPSDFFRKGD
NVRGIIESVELKGNKPQIIMSRTSEKFLEKLFEQEIPEVFDGLIMVKNVVRIPGEKAKVA
VDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDVINYTTNTQLYITRALSPAKVSSIK
INEETKRAEVFLKLEEVSKAIGRGGHNIKLAGQLTGYELDVIREGTVAADDDVELTEFSD
EIEAWVIEEFAKIGLDTAKSILSQDVNDLVRRTDLEEETILEVVKILKEEFEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttagcattaatagattcattttcagaatttaaggacgacaaatcgatagat
cgtccaacgctcatggcgattttagaagatgtgtttagaaacgcattgaagaaaaaatac
ggttcagacgataattttgatatcattattaatcctgataaaggagatatggaaatctgg
caaagaagagtaattgtagccgatgatgatttagatttagatcaccttgaaattacactt
accgatgcaagaaaaatagagccagatttcgaaattggtgaagaagtatctgaagaagta
aaattaatagacctaggaagaagagccattttagcattacgccaaaatcttatttcaaaa
attcacgaacatgacaatacaaatctttacaaacaatttaaagatttaattggagatata
tacactggagaagttcatcacgtgcgtccaagagtagtaatacttgtagatgacgaagga
aatgaaattattttaccaaaagaaaaacaaatcccgtctgactttttccgtaaaggagat
aacgttcgtggaattattgaaagtgtcgaactaaaaggaaataagcctcaaattattatg
tctagaacctcagaaaagtttctagaaaaattatttgagcaagaaataccagaagtattc
gacggattaatcatggtaaaaaatgttgttcgtattcctggtgaaaaagcaaaagtagct
gtcgattcttacgatgatcgtatagacccagtaggtgcttgtgtgggaatgaaaggatca
cgtattcacggaattgttcgcgaattaggaaacgaaaatatagacgtaattaactatacg
actaacactcaattgtatattacaagagcactaagtccagcaaaagtatcttctattaaa
ataaatgaagaaacaaaacgtgccgaagttttcttgaaattagaagaagtttcaaaagca
attggtcgtggcgggcacaacatcaaactagcaggtcagttaactggttatgagcttgat
gtaattagagaaggaaccgtagcggcagatgatgatgtagaattaacagaattctcagac
gaaattgaagcttgggttatcgaagaatttgcaaaaattggcttagacactgcaaaaagt
atcctaagtcaagatgtaaacgacttggtaagaaggactgatttagaagaagaaactatt
ctcgaagtagttaaaatattgaaagaagaatttgaagagtaa
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