Flavobacterium psychrophilum v4-33: IA06_02595
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Entry
IA06_02595 CDS
T03661
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk02024
Quorum sensing
fpk03060
Protein export
fpk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IA06_02595
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IA06_02595
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IA06_02595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fpk02044
]
IA06_02595
Secretion system [BR:
fpk02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IA06_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
AIG40764
LinkDB
All DBs
Position
586658..589642
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AA seq
994 aa
AA seq
DB search
MHNRGLIKFIAIIFALVSIYQLSFTFVANKVKSDAKAFAAGKPENEVKYLDSIGKENVFN
LGFTNFTYDEVKTKQINKGLDLEGGINVILQISVKDVLKQLANNSTNPVFVKSLADAKNN
QKGNQTYLNAFYDAFDANSNGTTLLSSPDIFGNRNLAEEIKMQMSDSDAKKIINKKVEES
IESAFRVLRERIDKFGVTQPNIVKLGTSGRILVELPGAKDVDRAKKLLSSTAQLEFWETL
KVDEIGSYLGSVNEALKKTEKATVAVDTAKSKTSSKIEGLLVDKTTKDSTATKKADAGPF
FNKIVSGGQQGSPVLAYVKSKDTAVINAYFKRSDIKALLPSNLVDTRFVWGKPSAKTGDV
VELYALKGNRTNTPPMSGSVLLDASNSYDQTGKPSVTMQMSGKGAKIWEELTGRAYTQKS
NIAIVLDNIVYSAPGVSSGPISGGRSEISGSFTIDETKDLANVLRAGKLPAAAEIVQSEV
VGPSLGQKAIDSGLNSSIVGLLLVSLWMLIYYGKSAWYANIALGVNLLFLFGVMASFGFV
LTLPGIAGIVLTMGTAVDANIIIYERAKEELRAGLSLDEAVKKSFSWTGAMRSIIDANVT
HILTGSILYIFGTGPIKGFALTLLIGIITSLFTSIFITRIFLDRAVAKGTKLEFANSWSK
DWFTGFNFDFLKIKKGTYIFSSCVIIVSLVSIFFVNGLDQGVDFVGGRTFQVKFEKPVEP
TAIAAELSKKDVFESAEAKIFGTEDQLKITTKYKIKEEGVSVDTEVNKKLYNALKPHFSS
SMTYEKFINSYEGKEFGVLQASKISPAISADIKTNSFWAVLGAMLVVGLYLVLSFRKLGY
SLGAIAAVLHDVVFVLGIYSLCYKFMPFHMEMDQHFIAAILTVIGYSMNDTVIVFDRIRE
FLAGNRKGNFNQIVNDSINTTLSRTINTSLTMLLVLLIMFIFGGESIRGFIFAMLVGIAV
GTYSSLFIATPVLVDTMSAKDKEEIDTRHANANV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcataatagaggacttattaaatttattgcaataatatttgcactggtaagtatttac
caactttctttcacatttgttgctaataaagtaaaaagtgatgcaaaagcttttgcagct
ggaaaaccagaaaacgaagtaaaatatcttgactcgataggaaaagaaaatgtctttaac
cttggtttcacaaacttcacctacgatgaggtaaaaacaaaacaaattaacaaaggtctt
gacctagaaggtggtatcaatgtaatactgcaaatctctgttaaagatgttttgaaacaa
ttagctaataactctacaaatccagtatttgttaagtcattggccgacgcaaaaaacaat
caaaaaggaaatcagacttacttaaacgccttttatgatgcttttgatgcaaattctaac
ggaactacattgctatcttctccagatatttttggaaacagaaatttagccgaagagatt
aaaatgcaaatgtctgattctgacgctaaaaaaataattaacaaaaaagttgaagaatct
atcgaaagtgcttttagagtacttcgtgagcgtatagacaaatttggtgttacacaacct
aatattgtaaaattaggaacttctgggcgtattcttgtagagcttccaggtgccaaagat
gtagatagagctaaaaaattattatcaagtacagcacaattagaattttgggaaacatta
aaagttgacgaaataggtagttatttaggttctgtaaatgaagctttaaagaaaacagaa
aaagcaacagtagccgtagatactgcaaaaagtaaaacttcttctaaaattgaaggatta
ttagtagataaaactacaaaagattcgactgctactaaaaaagcagatgctggaccattt
tttaacaaaatcgtaagtggcggacagcaaggaagcccagtattagcttatgtaaaatct
aaagatacagcagtaattaatgcttatttcaaacgttcagatatcaaagctttattgcca
agtaatttagtagatactagatttgtttggggaaaaccatctgcaaaaacaggtgatgtt
gtcgaattgtacgcattaaaaggaaatagaacaaatacgcctcctatgagtggtagcgta
cttttggacgcttctaattcgtatgatcaaacagggaaaccatcggtaacaatgcaaatg
agtggtaaaggagcaaaaatctgggaagaactaacaggaagagcttatactcaaaaaagt
aatattgcaattgttttagacaatatcgtttactctgctccaggtgtttcttctggacca
atttctggtggacgttctgaaatttccggatcatttactatagatgaaactaaagatcta
gctaacgttttgcgtgctggtaaattacctgcagccgcagaaatagtgcagtctgaagta
gtagggccatcattagggcaaaaagcaatagatagtggtttaaattcttctatcgttggt
ttattacttgtgtcattatggatgttaatctattatggaaaatcagcttggtatgcaaac
attgcattaggggttaatttattattcctttttggtgtaatggcaagtttcggtttcgta
ttaacattgccaggtattgcaggtatcgttttaacaatgggtacagcagtagatgctaat
attattatatacgaacgagcaaaagaagaattgcgtgcaggattaagtctagatgaagcg
gttaaaaaatctttcagttggactggggctatgcgttctattatcgatgcaaacgtaaca
catattttaacaggatctattctttatatttttggaacaggacctatcaaaggttttgca
ttaactttattaataggtattatcacttcattatttacatctatttttattacaagaata
tttttagatagagctgttgcaaaaggaaccaaattagaatttgccaatagttggtctaaa
gattggtttacaggtttcaatttcgacttcttgaaaattaaaaaaggaacgtatatattc
tcatcttgtgttattattgtcagtttagtttctatattctttgtaaatggattagaccaa
ggtgtagattttgttggcggaagaacttttcaagttaaatttgaaaaaccagtagaacca
acagcaattgcagccgaattatcaaagaaagacgtttttgaaagtgcagaagccaaaatt
tttggtacagaagatcaacttaaaataactacaaaatataaaattaaagaagaaggagta
agtgttgatacagaagtgaataaaaaattgtacaatgctcttaaacctcatttttcttca
agtatgacttatgagaagtttataaactcttacgaaggtaaagaatttggtgtattgcaa
gcttcaaaaataagtccagctatttcagcagatatcaaaacaaactctttctgggctgtt
ttaggcgcaatgttggtagtaggtctttatttagtgctttctttccgtaaattaggatat
tcattaggcgcaattgcagcagttctgcatgatgttgtatttgtattgggtatttactct
ttatgttataaatttatgcctttccacatggaaatggatcagcattttattgcagcaatc
cttaccgtgattggttactcgatgaatgacactgttattgtatttgacaggattagagag
ttccttgctggaaacagaaaaggaaactttaatcaaatcgtaaatgactctattaatact
acattatctagaacaatcaatacttcattaactatgttattggtattgttaatcatgttt
atctttggtggagaatctattagagggtttatcttcgcaatgttagtaggtattgcagta
ggaacttattcctctttatttattgcaactccagtattagttgatacaatgtctgcaaaa
gacaaagaagaaatagatacaagacatgctaatgcaaacgtataa
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