Flavobacterium psychrophilum v4-33: IA06_03355
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Entry
IA06_03355 CDS
T03661
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk00260
Glycine, serine and threonine metabolism
fpk00460
Cyanoamino acid metabolism
fpk00630
Glyoxylate and dicarboxylate metabolism
fpk00670
One carbon pool by folate
fpk00680
Methane metabolism
fpk01100
Metabolic pathways
fpk01110
Biosynthesis of secondary metabolites
fpk01120
Microbial metabolism in diverse environments
fpk01200
Carbon metabolism
fpk01230
Biosynthesis of amino acids
fpk01240
Biosynthesis of cofactors
fpk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IA06_03355 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IA06_03355 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IA06_03355 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IA06_03355 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IA06_03355 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IA06_03355 (glyA)
Enzymes [BR:
fpk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IA06_03355 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
DUF3287
Motif
Other DBs
NCBI-ProteinID:
AIG40905
UniProt:
A0A075RY88
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Position
740495..741769
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AA seq
424 aa
AA seq
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MLRDQQIFDLIIEEQDRQIHGLELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVVDVIEQIAIDRAKDLFGAEYANVQPHSGSQANTAVFAACLKPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPTFYGVEPETGMLNYDKIQEIATKEQPKLIIAGASAYSRDMDFERFR
KIADSVGAILMADISHPAGLIAKGLMNDPIPHCHIITTTTHKTLRGPRGGLIMMGKDFEN
PWGLKTPKGEIRMMSHVLDMSVFPGNQGGPLEHIIAAKAVAFGEALTDEFFRYAMQVQKN
AKAMAAAFVKRDYHIISGGTDNHMMLIDLRNKNISGKEAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTPAITTRGLLEEDMETIVAFIDKVIMNHTNEEILEEVADAVNEMMGERA
IFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgaccaacaaatatttgacctaattattgaagaacaagacagacaaattcac
ggactagagctaattgcttccgaaaattttgtaagcgaccaagtaatggaagctgcagga
tctgtactaacaaataaatatgccgaaggatatcctggaaaaagatattacggcggttgt
gaagtagtcgatgttatcgagcaaattgcaatagatagagccaaagatttatttggtgcc
gagtatgcaaacgtgcaaccacattcagggtcgcaagcaaatacagcagtttttgcagct
tgtttgaaaccaggagatactattttaggtttcgatttatctcacggaggacatttaact
cacggatctccagtaaacttttcaggaaaattatacaatcctactttttatggggtagag
ccagaaacaggaatgctaaactatgataaaatacaagaaattgcaacaaaagagcaacca
aaactaatcattgcaggcgcatctgcttattctcgtgatatggattttgaacgtttccgt
aaaattgcagattcagtaggagcaattttgatggctgatatttcgcatccagcgggatta
atcgctaaaggattaatgaacgacccaattccacattgtcatattataacaacaacaacc
cataaaacacttcgtgggcctcgtggcggattaattatgatgggtaaagattttgaaaac
ccttggggtttaaaaacaccaaaaggagaaataagaatgatgtctcacgttttagatatg
tcagtttttccaggaaatcaaggaggtccactagaacacattatcgcagcaaaagcagta
gcgtttggagaagcattaaccgatgagttttttagatatgccatgcaagtgcaaaaaaat
gccaaagctatggcagccgcttttgtaaaaagagattatcatattatctctggcgggacg
gacaatcacatgatgcttatcgatttaagaaataaaaatatttctgggaaagaagccgaa
aatgctttagtaaaagcagaaattacggtaaacaaaaacatggtcccttttgatgataaa
tcaccatttgtaacttcaggaattcgtgtaggaacgccagctattacaactcgtggcttg
ctagaagaagatatggaaactattgttgcttttattgataaagtaattatgaatcataca
aatgaagaaattctagaagaagttgcagatgcagtaaatgaaatgatgggcgaaagagcg
attttcgtattttaa
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