KEGG   Flavobacterium psychrophilum v4-33: IA06_04485
Entry
IA06_04485        CDS       T03661                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
fpk  Flavobacterium psychrophilum v4-33
Pathway
fpk03030  DNA replication
fpk03430  Mismatch repair
fpk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fpk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    IA06_04485
   03430 Mismatch repair
    IA06_04485
   03440 Homologous recombination
    IA06_04485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpk03032]
    IA06_04485
   03400 DNA repair and recombination proteins [BR:fpk03400]
    IA06_04485
Enzymes [BR:fpk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     IA06_04485
DNA replication proteins [BR:fpk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     IA06_04485
DNA repair and recombination proteins [BR:fpk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     IA06_04485
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid AAA_22 AAA_14 RuvB_N AAA_5 AAA_30 Rad17 nSTAND3 DNA_pol3_delta_C AAA_16 DNA_pol3_gamma3 RCF1-5-like_lid NTPase_1 AAA_19 AAA_24 RNA_helicase AAA_18 Sigma54_activ_2 AAA_7 NACHT Mg_chelatase AAA_28 AAA_assoc_2 DUF815 NPHP3_N GNAT_acetyltr_2 AAA_2 AICE_RepA dNK TsaE T2SSE
Other DBs
NCBI-ProteinID: AIG41105
UniProt: A0A075RL74
LinkDB
Position
996107..997192
AA seq 361 aa
MEQFVVSARKYRPQTFKDVVGQQAITNTLLNAIETNHLASALLFTGPRGVGKTTCARILA
RKINQPGYDDPNEDFAFNVFELDAASNNSVDDIRNLIDQVRIPPQTGQYKVYIIDEVHML
SSAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVKDAKEHLAEVA
TNQGVIFEDDALHIIAQKADGAMRDALSIFDRVVSFCGKNLTRQAVTENLNVLDYETYIN
VTNLILENKIPELLLAYNDILAKGFDGHHFVAGLASHFRDLLVSKTPATITLLEVGEQAQ
KMYYVQSQKASQDFLLQGIDLANDCDLKFKLSQNQRLLVELCLMQLASITFDGEKKKLNN
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaacaatttgtagtatcggctcgtaaatatcgtccgcaaacgtttaaagacgtggtg
gggcaacaagccattaccaatacgttactaaatgcgatagaaacaaatcatttggcatca
gccctattatttactggtcctcgtggcgtaggaaaaacaacttgtgccagaattttagcc
agaaaaataaaccaaccaggttacgacgacccgaacgaagattttgctttcaatgttttc
gaactcgatgcggcttcaaacaattcggtcgatgatattcgtaatctaatcgatcaagtt
cgtatccccccacaaacgggacaatataaagtttatattatcgatgaggttcacatgtta
tcatctgcagcatttaatgcttttttgaaaacattagaagaaccaccaaaacatgccatt
tttattttggcaacgaccgaaaaacataaaattattccaacgatattatctcgttgtcag
atattcgatttcaaaagaattactgtaaaagatgccaaggaacatctcgccgaagtagct
accaatcaaggtgtcattttcgaagacgatgctttgcatattattgcccaaaaagcagat
ggtgccatgcgcgatgctttgtctatttttgatagagttgtgtctttttgtggaaaaaac
ctaacacgacaagcagttaccgaaaacttgaatgtgctagattatgaaacctatattaat
gtaacgaatttaattttagaaaataaaattccagaattactattggcttacaacgatatt
ttggcaaaaggtttcgatgggcatcattttgtagctggattggcttcgcattttagagat
ttgttggttagcaaaacccctgcaactatcactttactagaagttggcgagcaagctcaa
aaaatgtattatgtacaatctcaaaaagcttcacaagattttctgttacaaggaatcgat
ttggctaatgattgtgatttaaaatttaagctttctcaaaaccagcgattactagtagaa
ctttgtttgatgcaactagcctctatcacttttgatggagaaaaaaaaaagctaaacaat
atataa

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