Flavobacterium psychrophilum v4-33: IA06_04540
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Entry
IA06_04540 CDS
T03661
Name
(GenBank) hydroxymyristoyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk00061
Fatty acid biosynthesis
fpk00540
Lipopolysaccharide biosynthesis
fpk01100
Metabolic pathways
fpk01212
Fatty acid metabolism
Module
fpk_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IA06_04540
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IA06_04540
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fpk01005
]
IA06_04540
01004 Lipid biosynthesis proteins [BR:
fpk01004
]
IA06_04540
Enzymes [BR:
fpk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
IA06_04540
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
IA06_04540
Lipopolysaccharide biosynthesis proteins [BR:
fpk01005
]
Lipid A
IA06_04540
Lipid biosynthesis proteins [BR:
fpk01004
]
Fatty acid synthase
Component type
IA06_04540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
DUF2118
Motif
Other DBs
NCBI-ProteinID:
AIG41115
UniProt:
A0A076P3N9
LinkDB
All DBs
Position
complement(1006827..1008215)
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AA seq
462 aa
AA seq
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MVKQKTINNEISLTGVGLHTGNEVRITFKPAPINNGFSFVRVDLEGSPIIEADANYVVNT
QRGTNLEKLGVKIQTPEHVLAALVGCDLDNVIIELNASELPIMDGSSKYFVQAIEKAGIA
EQEAERNVYVVKEVISYLDESTGSEIIVMPCDDYQVTAMVDFGTKVLGTQNASLKNISQF
KDEIADCRTFSFLHELETLLENGLIKGGDLNNAIVYVDKEISAETMNRLKIAFGKDKISV
TPNGVLDNLTLHYPNEAARHKLLDVIGDLSLIGTRIKGKVIANKPGHFVNTQFAKKMSKL
IKNEQRNFVPVYDLNKEPLMDIHKIMSILPHRPPFLFVDRIIEMTDCSVVGLKNVTMNET
FFVGHFPGAPVMPGVIIVEAMAQTGGILILSSVPDPENYLTFFMKIDNVKFKQKVLPGDT
LIFKCDLITPIRRGICHMQAHAYANGKLVAEAELMAQIAKKQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacaaaaaaccatcaataacgaaatttcccttacaggagttggacttcataca
ggaaatgaagtaaggataacatttaaaccagcccccataaataatggtttttcttttgtt
agagtagatttagaaggttcgcctataattgaagccgatgcaaattatgttgtaaacacg
caacgaggcacaaatctagaaaaattaggcgtaaaaattcagacaccagaacatgtctta
gccgccttagtaggttgcgatttagacaatgttattatcgaattgaatgcttctgaactc
ccaattatggacggttcctcaaaatattttgtgcaagctatagaaaaagcaggcatcgca
gaacaagaagccgaaagaaatgtgtatgtcgtcaaagaagttatttcctatttagatgaa
tctacaggaagcgaaataattgtaatgccctgcgatgattatcaagtaaccgctatggtc
gattttggtactaaagtattaggaactcaaaatgcaagcctcaaaaatattagccaattt
aaagacgaaatagcagattgtcgtacctttagttttttacacgaactagaaactttgtta
gaaaacggattaataaaaggaggcgatttaaacaatgccattgtttatgtagataaagaa
atttctgcagaaaccatgaacaggctaaaaatagctttcgggaaagataaaatttcggtt
acaccaaatggtgttttagacaatcttaccctgcactatcccaacgaagcagcaagacac
aaattactcgatgtaataggagatttatccttaataggaacaagaataaaaggaaaagta
atagcaaataaaccaggtcattttgtaaatactcaatttgcaaaaaaaatgtctaaatta
ataaaaaatgagcaaagaaattttgttccagtttatgatttaaacaaagaaccattgatg
gatattcacaaaattatgagtattttgccacaccgtccgccatttttatttgtagataga
attatcgaaatgacagactgctctgtagttggattaaaaaatgtaacaatgaacgaaaca
ttctttgtaggacattttccaggcgcaccagttatgcctggggtcattattgtagaagcc
atggcgcaaacaggaggaattttaattctaagttcagtccctgatccagaaaattattta
accttctttatgaaaatagataatgttaaatttaaacaaaaagtactaccaggtgataca
ctaatattcaaatgcgatttaataacccctataagaagaggtatttgccacatgcaagct
cacgcttacgcaaatggtaaactggttgctgaagccgaattgatggcgcaaattgccaaa
aaacaataa
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