Entry |
|
Name |
|
KO |
K08301 | ribonuclease G [EC:3.1.26.-] |
|
Organism |
fpk Flavobacterium psychrophilum v4-33
|
Brite |
KEGG Orthology (KO) [BR:fpk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fpk03019]
IA06_08000
03009 Ribosome biogenesis [BR:fpk03009]
IA06_08000
Messenger RNA biogenesis [BR:fpk03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IA06_08000
Ribosome biogenesis [BR:fpk03009]
Prokaryotic type
rRNA processing factors
IA06_08000
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1735086..1736630
|
AA seq |
514 aa
MNKELIIRSSSDAVDFALLKDGKLIELHKEEETSNFQVGDIFIAKIRKPVAGLNAAFVNV
GFEKDAFLHYHDLGPNLASQMKFIKLVTTGKIKDFSLKSFQFEKEIDKDGTITDVIAVNQ
SILVQVVKEPISTKGPRISSELSLAGRYIVLVPFSDRVSISQKIDSKEEKDRLKRLVQSI
KPKGFGVIVRTVAEGKKVAEIDKDLQNLMDKWTSMCKRIPTAHHPSKVLGELNRASSILR
DVFNDTFSGIIIDDEELFNETKEYIQQIAPSKESMVKLYQSKDTPIFEKYSIERQIKTSF
GKSVSMSKGAYLIIEHTEAMHVIDVNSGNRSNKATNQEDTALEVNMIAAAEVARQLRLRD
MGGIICVDFIDMSNPDNRKVLFDFLREEMSDDKAKHKILPPSKFGIVQITRQRVRPEVNI
ETREENPNNENSDIEAPILIIDRIASDLERIIKLHKKVVLNVHPFIAAYLVKGYPSIRSK
WFFEYKKWIKIIPRDSYTYLEYHFNDNQGKEIKD |
NT seq |
1545 nt +upstreamnt +downstreamnt
atgaataaagaattgattattagatctagttctgacgctgtagattttgccttattaaaa
gatggaaaattaatcgaattacataaggaagaagaaacaagcaattttcaagtaggtgat
atttttattgccaaaataagaaaaccagttgctggtcttaatgctgcttttgtaaatgta
ggcttcgaaaaagatgcctttttacattatcatgatttaggacctaatcttgcttctcag
atgaaattcataaaacttgtaacaacaggtaaaataaaagatttctcccttaaaagtttc
caatttgaaaaagaaattgataaagatggcacaattaccgatgtaattgcagttaatcaa
tcaattcttgtacaagtggtaaaagaaccaatatctaccaaaggaccaagaataagctca
gagctttcgcttgccggtaggtatatagttttagtacccttttctgaccgcgtttctatt
tctcaaaaaatagactctaaagaagaaaaagacaggctaaaacgccttgtacaatctatc
aaaccaaaaggattcggtgttattgttcgcacagtagcagaaggcaaaaaagttgcagaa
atagacaaagacttacaaaacttgatggacaaatggacatctatgtgcaaacgtattcca
acagcacatcatccatcaaaagtgctaggagaactaaacagagcatcatcaatattacga
gatgtttttaacgatacttttagcggaattattatagatgacgaagaactatttaacgaa
acgaaagagtacatacaacaaattgctcccagtaaagaatcaatggtaaagctttatcag
tcaaaagacactccaatttttgaaaagtacagtatcgaaagacaaataaaaacttcgttt
ggaaaatccgtatcgatgagtaaaggtgcttacctaattatagagcacaccgaagccatg
cacgttatcgatgtaaacagcggaaaccgatcaaacaaagccaccaatcaagaagacaca
gcgctcgaggtaaacatgattgccgctgccgaagtagcaagacaattgcgtttaagagat
atgggtggtataatatgtgtcgattttatagatatgtctaatccagacaatcgtaaagta
ctgttcgatttcttaagagaagaaatgagtgacgacaaagcaaaacacaaaatattgcct
cctagcaaattcggaatagtacaaattactagacaaagagttagaccagaggtaaatatt
gaaactcgcgaagagaatcctaataatgaaaacagtgacattgaagcacctattttaatt
attgaccgaattgcttccgatctagaaagaattataaagttgcataaaaaagtagtactt
aacgtacacccatttatagctgcttaccttgtaaaaggatatccatcaatacgttcaaaa
tggttttttgaatacaaaaaatggataaaaatcattccacgtgactcctacacgtacctc
gaatatcattttaatgacaaccaaggaaaggaaataaaagactaa |