Flavobacterium psychrophilum v4-33: IA06_08970
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Entry
IA06_08970 CDS
T03661
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fpk
Flavobacterium psychrophilum v4-33
Pathway
fpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IA06_08970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpk03400
]
IA06_08970
Enzymes [BR:
fpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IA06_08970
DNA repair and recombination proteins [BR:
fpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IA06_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
WHD_PriA_bact
ResIII
Zn_ribbon_PriA
Helicase_C
HTH_65
PriA_C
Cas3-like_C_2
DUF3686
nSTAND3
Nrap_D6
AAA_19
AAA_30
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
AIG41927
LinkDB
All DBs
Position
complement(1936522..1938972)
Genome browser
AA seq
816 aa
AA seq
DB search
MPFFIQVILPLTLPQTFTYSVSEAEFEYLKIGMRVAVPFGKSKFYTGLVLELHHNAPTLY
EAKEIHQIVDQKPIVTEVQLQHWQWIASYYMCTLGEVFRCALPSALQLESETIISAKKDF
IINENELSDEEYLLVEALKQQSSLKISEVTSVLNKKKVLPIIQQLLAKNVITLQEEMIEE
YKPKLVRYIRLFSQFNSNDKLEELLLVLKNAQKQKEILLSYFQLQATTKKPISVKGLTEF
SGGTLAVIKALIDKEIFEEYYIQEDRVSFDDVNISQIVLSEPQDKALSAIETVFTSKEVC
LLHGITASGKTEVYIKLVEKFLEQKKQCLYLLPEIALTTQLVSRLTKHFGNKVAVFHSKY
SNNERVEVWNQVLNSSEKAQIVIGARSALFLPFQDLGFIIVDEEHEQTFKQTDPAPRYHA
RDAAIVLANFHKAKVLLGSATPSIETYFNTKNDKYGLVELHERFGNAVLPEIELVDLKDS
YFRKKMTGHFSQNLIDAIAEALSNGEQVILFQNRRGYSPVIECMTCGHVPQCPQCDVSLT
YHKFKNQLRCHYCGYSIAKPTNCHACSSIDLTSKGFGTEQIELELASLFPTKNIKRMDQD
TTRGKNAFEKLIGSFKNREIDILVGTQMLAKGLDFDNVSLVGILNADSMLYFPDFRAFER
SFQMMTQVSGRAGRSDKKGKVIIQTYNTNHNTIQQVVQNDYLSMFNEQLYERKIYHYPPY
FKLIKLTLKQKDFDKLKEGSMWLYQVLKQQFDIPVLGPEEPAINRIRNEYIRTILIKIPQ
EKSLGNTKKTIQKILNSFESVSQFRAIKVGVNVDFY
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcttcattcaagttattttaccacttacacttccgcaaacgtttacatatagc
gtttcggaggcagaattcgagtacctgaaaataggtatgcgagtagcagttccttttggt
aaaagtaaattttatacaggtttggttttggagctacatcacaatgcgccaactttatat
gaggccaaagaaattcatcaaattgtagatcagaaacctattgtaaccgaggtacaattg
caacattggcaatggattgcatcctattatatgtgtacgttgggcgaagtttttaggtgc
gctttgccatcggcattgcaattagaaagcgaaacaattatttctgccaaaaaagatttt
attattaatgaaaacgagctttcggacgaggaatatttattagtagaagccttaaaacag
caaagctctctaaaaattagcgaggttacttcggtattaaacaaaaagaaagttttacct
atcattcagcaacttttggctaaaaatgttattacacttcaagaagaaatgattgaagaa
tacaaacccaaattggtgcgttatattcggttgttttcccagtttaattctaatgataaa
ttggaagaattattattggttctaaaaaatgcacaaaaacaaaaagaaatattattaagt
tattttcagttgcaagctactacaaaaaagcctatttcggttaaaggattgactgaattt
tctggaggaaccttggcagttataaaagcactaatcgataaagaaattttcgaagaatat
tatatccaagaagatcgagtttcgtttgatgatgtaaacataagtcagattgtattaagc
gaaccacaagacaaagctttatcggcaattgaaacagtttttacttcaaaagaagtttgc
ttgctccacggaatcaccgcttcgggaaaaacagaagtatatatcaagctagttgaaaaa
tttttagagcaaaaaaaacagtgtttgtacttgttgccagaaattgcgcttaccacacaa
ttggtttctagattaaccaaacatttcgggaataaagtagctgtttttcattcgaaatat
agcaataatgagcgtgttgaggtttggaatcaggttttaaattcgtccgaaaaagctcaa
attgttattggagcccgctcggcactattcttgccttttcaagatttaggattcattatt
gtcgatgaagaacacgaacaaacatttaaacaaactgaccccgcaccaagataccatgct
cgtgatgcagcaattgttttggcaaattttcataaagccaaagtgttgttaggttccgca
acaccaagcattgaaacttattttaatactaaaaacgacaaatacggattggtcgaattg
cacgaacgtttcggaaatgctgttttaccagaaatagaattggtcgatttaaaagatagc
tatttccgcaaaaaaatgacagggcattttagtcaaaacctaatagatgctattgcagaa
gcattatctaacggggaacaagttattttgtttcaaaaccgtcgtggttattcgccagtg
atcgagtgtatgacttgtggtcatgtaccacaatgtccgcaatgtgatgtgagtttaaca
tatcataagttcaaaaaccaattgcgttgtcattattgtgggtatagtattgccaaaccc
actaattgtcatgcttgttctagtatcgatttaacttccaaagggtttggaaccgagcaa
atagaattagaattggcttcactttttccaacaaaaaacatcaaacgaatggaccaagat
actactcgaggtaaaaatgctttcgaaaaattgattggtagtttcaaaaatagagaaata
gatattctagtaggcacacaaatgcttgccaaaggtttagattttgataatgtatcgctt
gtaggaatccttaatgccgattcgatgctatattttccagattttagggctttcgaacgt
agtttccagatgatgacacaagtatcgggtagggcaggaaggtctgataagaaaggaaaa
gtgattattcaaacctataatactaatcacaatacgattcagcaagtagtgcaaaatgat
tatttgtctatgtttaatgagcaattgtatgagagaaaaatataccattatccgccttat
ttcaagttaattaaattaaccttaaaacaaaaagacttcgataagctaaaagaaggctct
atgtggttgtaccaagttttgaaacagcagtttgatattccagttcttggaccagaagaa
ccagctataaatcgtattcgaaacgagtatattcgaacaattttgataaaaatcccgcaa
gaaaaatcattaggaaatacaaaaaaaaccattcagaaaattctgaatagtttcgagtct
gtttcgcaatttagagctatcaaagtaggggtaaatgtcgatttttattga
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