Flavobacterium psychrophilum v4-33: IA06_10465
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Entry
IA06_10465 CDS
T03661
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fpk
Flavobacterium psychrophilum v4-33
Brite
KEGG Orthology (KO) [BR:
fpk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fpk01002
]
IA06_10465
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpk01011
]
IA06_10465
Peptidases and inhibitors [BR:
fpk01002
]
Cysteine peptidases
Family C82
IA06_10465
Peptidoglycan biosynthesis and degradation proteins [BR:
fpk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IA06_10465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AIG42201
UniProt:
A0A075SFW1
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All DBs
Position
2253876..2255576
Genome browser
AA seq
566 aa
AA seq
DB search
MKPIYLLIPLIVFICCKKNTLDKNPDNSSFIHFPFLNYSVKIDSVVISNLNNPNLVAFYK
NYNNETVWVLEEDRTAVLNEFKDATNEGLLPNDYNYTLLNTLSSNYNHLEDNKLIEFDLL
LTQSIQKYISHIYKGKINPRTIYKDWDLKEKNIDINTVLFEIIEKKSFASKFEDLKPKHP
IYKNLKQALQVLNAFPKDSVPFVILKPKDKIALNKSNKAVKIIKSRLMYWHDMKQANTIT
NIYDKETQDAVKTFQSRHGLTPDGLIGKGTILALNFTKNQRIEQVISNLERWRWFASDFG
QNYLLINIPDYSLLAIKNNDTMQKQRIVVGKDTRQTPILESKVSNINLNPNWTVPPTILK
EDIYPDAIKDKGAFKKKGLVILDHKNKEINPWSWTIEDAKKYKYVQNPGKNSSLGLMKIN
FPNKYSVYLHDTNHRDFFGLNYRSLSSGCVRLEKPLEMAEYLINNPEKWNLKTIQDTTDI
NHYNKLQKEKEKKIAIKNAKLLAKNPLLVIPEKTYPKQELKTIVVRIADDIFIHQLYWTA
WLQKETLQFREDIYCLDSDLYNKLRN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatttacttactcattccgcttatagtttttatttgttgcaagaaaaatact
ttagataaaaatcctgataacagttcatttatacattttccttttcttaattattctgta
aaaatagattcagtagtaataagtaacttaaataatcccaatttagtcgctttttataaa
aattacaacaacgaaaccgtttgggttttagaagaagacagaaccgcagtattaaacgaa
tttaaggacgctacaaatgaaggtttacttccaaacgattataattataccctactaaac
acactaagttctaattacaaccacctagaagacaacaaattaatcgaatttgatttgtta
ctcacacaaagcattcaaaaatatatttcacatatatataaaggaaaaataaaccctaga
acaatatacaaagattgggatttgaaagaaaaaaacatcgatataaatacggtacttttt
gaaattattgaaaaaaaatcttttgcctcaaaatttgaagatttaaaacccaaacatcct
atttataaaaacttaaaacaagcattacaagtgcttaacgccttccctaaagattctgtc
ccgtttgttatattaaaacccaaagacaaaatagctcttaacaaatctaataaagcagta
aaaatcattaaaagccgattaatgtattggcacgacatgaaacaagccaataccattacc
aatatttatgacaaagaaacacaagatgcggtaaaaacatttcaatctcgacacggatta
acccctgacggacttataggtaaaggaactattttagccttaaactttaccaaaaaccaa
cgaattgaacaagtcatctcaaacctagaacgatggcgatggtttgcaagcgattttgga
caaaattatcttttaataaatatccctgactacagtttacttgcaatcaagaacaacgac
accatgcaaaaacaacgaattgtagtaggaaaagatactagacaaacccctattttagaa
tcgaaagtttctaacatcaatctaaatccaaactggaccgttccccctacaattcttaaa
gaagacatatatcccgacgctataaaagacaaaggcgcttttaagaaaaaaggattggtt
attttagaccataaaaacaaagaaataaacccttggagttggacaatagaagatgctaag
aaatataaatacgtgcaaaaccctggaaaaaacagttcattaggactcatgaaaataaat
ttcccaaacaaatattctgtatatcttcatgacactaaccatcgtgatttttttggtctc
aattacagatcattaagttctggctgtgtaagattagaaaaacctttagaaatggcagaa
tatttaataaacaatccagaaaaatggaatttaaaaaccatacaagataccaccgatatt
aatcattacaacaaacttcaaaaagaaaaagaaaagaaaattgcaataaaaaacgccaaa
cttttggcaaaaaatccattattagtcattcccgaaaaaacatatccaaaacaagaacta
aaaacaattgtggtaagaattgcagatgatatttttattcatcaattatattggacagcc
tggttacaaaaagaaacactacaatttagagaagatatttattgcttagattctgattta
tataataaattaagaaactaa
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