KEGG   Flavobacterium psychrophilum v4-33: IA06_11645
Entry
IA06_11645        CDS       T03661                                 
Name
(GenBank) pseudouridine synthase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
fpk  Flavobacterium psychrophilum v4-33
Brite
KEGG Orthology (KO) [BR:fpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fpk03016]
    IA06_11645
Enzymes [BR:fpk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     IA06_11645
Transfer RNA biogenesis [BR:fpk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    IA06_11645
 Prokaryotic type
    IA06_11645
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: AIG42408
UniProt: A0A075RTK3
LinkDB
Position
complement(2516223..2516927)
AA seq 234 aa
MTPEDYLNGQVLLIDKPLKWSSFQAVNKLKYSLINKLGLPKKFKIGHAGTLDPLATGLLI
VCTGKLTKSISEIQGQAKEYTGTFYIGATTPSYDLETQIDATFPIAHITEALIHETVKQF
LGEIDQKPPVFSAIKKDGVRLYEHARAGVEVEIASRKTQIYEFEITRIALPEIDFRVVCS
KGTYIRSLAYDFGLALQSGAHLTVLRRTKIGNYDVKKAIDVTLFDELIVAKNEL
NT seq 705 nt   +upstreamnt  +downstreamnt
atgactccagaagattatctaaacggtcaagttttactcatagacaaaccattaaaatgg
agttcttttcaagcagtaaataaattaaaatattcgcttataaataaattaggattacca
aagaagttcaaaattggccatgcaggaacactcgatccattagccacaggtttgttaatt
gtttgtacaggaaagcttacaaaaagcatttccgaaatacaaggtcaggccaaagaatat
acaggtactttctacattggcgccactacaccatcgtatgatttagaaacccaaatagac
gccactttcccaatagcacatattaccgaagccttaattcacgaaacagtgaaacaattt
ttaggcgaaatagatcaaaaaccacccgttttttcggctataaaaaaagacggcgtgcga
ttatacgaacacgctcgtgctggtgttgaagtagaaatcgcttctagaaaaacacaaatt
tacgaattcgaaattactcgaatcgctttgccagaaatcgattttagagtcgtttgtagt
aaaggaacttatattcgttcgttagcttatgattttggattggctttgcaatctggcgca
catcttactgttttgcgaagaacaaaaattggcaattatgatgtaaaaaaggctattgat
gttactttgtttgatgaattgattgttgcaaaaaatgaattataa

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