KEGG   Ferroglobus placidus: Ferp_0025
Entry
Ferp_0025         CDS       T01172                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
fpl  Ferroglobus placidus
Pathway
fpl03030  DNA replication
fpl03410  Base excision repair
fpl03420  Nucleotide excision repair
fpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Ferp_0025
   03410 Base excision repair
    Ferp_0025
   03420 Nucleotide excision repair
    Ferp_0025
   03430 Mismatch repair
    Ferp_0025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fpl03032]
    Ferp_0025
   03400 DNA repair and recombination proteins [BR:fpl03400]
    Ferp_0025
Enzymes [BR:fpl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Ferp_0025
    6.5.1.6  DNA ligase (ATP or NAD+)
     Ferp_0025
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Ferp_0025
DNA replication proteins [BR:fpl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Ferp_0025
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Ferp_0025
DNA repair and recombination proteins [BR:fpl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Ferp_0025
   NER (nucleotide excision repair)
    Other NER factors
     Ferp_0025
   MMR (mismatch excision repair)
    Other MMR factors
     Ferp_0025
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme RNA_ligase
Other DBs
NCBI-ProteinID: ADC64217
UniProt: D3S0Y1
LinkDB
Position
19404..21071
AA seq 555 aa
MLTFKEFAEFCSVIEKISSTLELTARIAAFIRKIEDEDDLYNVIHFLMGRIFPPWDEREI
GVGVGLIYEALRQVTGVSKSRIEQLVKETGDLGLAAERLLKEKKQTTLFQEELTIKRVKE
IFEEMAKLSGEGSQKRRVMLLTDLYVSATPIETRYLTRLILGEMRLGVGEGIIRDAIARA
FGIDSSIVERAYMLTNDYGRVAVVAKKEGKDGLMRMKIQLHYPVKMMLAQVAESVDEALR
EMREAAVEWKYDGSRVQVHYGNGKVTIFSRRLENVTSALPEIVDEVKKCVRENVILDGEV
IAVKDGKPMPFQQVLRRFRRKHEISKAMERIPLIVYFFDILYDGEMLIDLPLKERRKKLE
EVIGESEIIKVAQQVITSDPKVVEEEFNRAIEAGHEGLMLKRLDSPYTPGKRGKLWLKLK
AVMETLDLVVVGGEWGEGKRSHLLSSFELACRDENGRLLRVGKVATGFTDEDLEELTELF
KPLIEYEEGKRVVFQPKYLFEVAYQEIQKSPKYESGFALRFPRFVRLRDDKSVEEADTLE
RIAKLYEMQFKSKGG
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgctaaccttcaaagaatttgctgaattttgtagcgtgatagagaagatctcgtcaact
cttgagctaacggcgagaatcgcagcctttataagaaaaatagaggatgaagacgatctt
tacaacgttattcactttctcatgggtagaatctttcctccttgggatgaaagagagatt
ggagttggagttgggctaatctacgaggctctcagacaggttaccggcgttagcaaaagc
aggatagagcagctggtaaaggaaaccggcgatctcggcttggctgctgaaaggcttttg
aaagagaaaaaacagacgactctatttcaggaagagcttacgataaaaagagtgaaagaa
atattcgaggagatggctaagcttagcggagaaggaagccagaaaaggagagtaatgctt
ttaacggatctctacgtcagcgcaactcccatagagacgagatacctcacaaggctaata
cttggagagatgaggctcggtgttggagaagggattattagggatgcgatagcaagagct
tttggaatagactcttcgatagtcgaaagagcttacatgctaacaaacgattacggaaga
gttgcagtcgtggctaagaaggaaggaaaggatggtttaatgagaatgaagatacaactt
cactatccagtaaaaatgatgcttgctcaggtggctgagagcgttgatgaggctttgagg
gagatgagggaggctgctgtggagtggaagtacgatggctcaagagttcaggttcactac
ggaaacggaaaagtaactattttctcaaggaggcttgaaaacgtaacttccgctcttcca
gaaatcgtcgatgaagtaaagaaatgcgttagagagaacgtgattctggatggggaggtt
atagctgtaaaagacggaaagcctatgccgttccagcaggttttaaggaggttcaggagg
aagcacgagatatctaaggctatggagagaattccgttgatagtctacttcttcgacatt
ctctacgacggagaaatgctcatagaccttccgcttaaagagaggagaaagaagctcgag
gaagttatcggcgaaagcgagataataaaagtagctcagcaagtaataacgagcgatccg
aaggttgttgaagaggaattcaatagggcaatagaggctggacacgagggtttaatgctt
aagaggctcgactctccgtacacaccgggaaaaagaggcaaattgtggcttaaactgaaa
gcggtcatggaaaccctcgacttggttgttgtcggtggagagtggggagaaggaaagaga
agccatcttctcagttcattcgaattggcttgcagagatgaaaacggaaggttgctgagg
gtcggaaaggtagctaccggctttactgacgaggacctcgaagagcttacggagcttttc
aaaccgcttatagagtatgaagaggggaagagggttgttttccaacccaagtacttgttt
gaagtggcttatcaggagattcagaagagtccgaagtacgagagcggatttgcgttgaga
ttcccgagattcgtgaggttgagagatgataagagtgttgaagaagccgacaccctcgaa
agaatagctaagctctacgagatgcagttcaaaagcaagggtggatag

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