| Entry |
|
|---|
| Name |
(GenBank) AAA family ATPase, CDC48 subfamily
|
|---|
| KO |
| K13525 | transitional endoplasmic reticulum ATPase |
|
|---|
| Organism |
|
|---|
| Pathway |
| fpl04141 | Protein processing in endoplasmic reticulum |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:fpl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Ferp_0216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fpl03019]
Ferp_0216
03009 Ribosome biogenesis [BR:fpl03009]
Ferp_0216
04131 Membrane trafficking [BR:fpl04131]
Ferp_0216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:fpl04147]
Ferp_0216
Messenger RNA biogenesis [BR:fpl03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Ferp_0216
Ribosome biogenesis [BR:fpl03009]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Ferp_0216
Membrane trafficking [BR:fpl04131]
SNARE
SNARE associated proteins
Others
Ferp_0216
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Ferp_0216
Exosome [BR:fpl04147]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ferp_0216
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(187089..189464)
|
|---|
| AA seq |
791 aa
MAKKEAVLRVAEAYYRDVGRSIARVDPEVMQELGLQSGDIIEIEGKSKVPAIVWPGYPED
RGKRIIRIDGNLRSNAGVSIDDKVKIRKVEAKVAERVVLAPTEPIRIMGGEAYLRRLLEG
RPIIRGQKIRVEAFGHTLTFVVVSTKPAGVVIVTPTTDFEIKEKPVEEVKRSVPSVTYED
IGGLKRELRLVREMIELPLKHPELFERLGIEPPKGVLLYGPPGTGKTLIAKAVANEVNAH
FIPISGPEIMSKYYGESEQRLREIFEEARENAPSIIFIDEIDSIAPKREEVTGEVERRVV
AQLLTLMDGLEARGQVIVIGATNRPDAIDPALRRPGRFDREIEIGVPDREGRKEILQIHT
RGMPIEPDYNRDDVIKVLKQLKEEKRFEEKELEELIAKIEKAKEDEIKKILEEKESIFNE
VRNRLIDLMLEELADLTVGFVGADLAALAKEAAMHALRKRIESGEIDVEAEEIPEEVLEN
LKVTKEDFLEALKNIEPSAMREVLVEVPKVTWNDIGGLEHAKQELREAVEWPFKYPELFK
AVGIKPPKGILLYGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFR
KARQVAPCVLFFDEIDSLAPRRGTGGDTHVTERVVSQLLTELDGLEELKDVVVIAATNRP
DMIDPALLRPGRLERHIYIPPPDEKARLEIFKIHTRGMPLDEDVNLEELAKKTEGYSGAD
IEAVCREAGMLAIREAIANVKSEEEVKEAARKIKVSKRHFEEALRKIKPSLTKEDIERYE
KIVKDFQKMYV |
|---|
| NT seq |
2376 nt +upstreamnt +downstreamnt
atggctaaaaaggaagctgtgttgagggtcgctgaagcttattatagggatgttggtagg
agcatcgcaagagttgatccggaggttatgcaagagctcggattgcagagcggagacata
atcgaaatcgaggggaagagcaaagttccggctatcgtatggcctggctaccccgaagac
aggggaaagaggataataagaatcgacggtaaccttagaagcaacgctggagtgagcatt
gacgataaggtaaaaataaggaaggttgaggcgaaggtggcagaaagagtcgttctcgct
ccgacggaaccgattagaataatgggtggagaagcgtatcttagaaggctgcttgaggga
agaccgataataagaggacagaagatcagagttgaagctttcggacacactttaactttt
gtagtcgtttcaaccaagccggctggagtggtaatagtcactcctacaacggacttcgaa
atcaaggagaagccagtggaggaagtgaagaggagcgtgccctcagttacttacgaagac
atcggtggtttgaagagagagctgaggctcgtcagggagatgatagaacttcctctgaaa
catccggagctgttcgaaagactcggtatagagccgcccaagggagttttgctgtacggt
cctcctggaaccggtaaaacgctaatagctaaggctgtagctaacgaagtaaacgctcac
ttcataccgataagcggtccagagataatgagcaagtactacggagagagcgaacagagg
cttagggagattttcgaggaggcgagagaaaatgcgccgagcataatattcatagatgaa
atcgacagcatagcccccaagagggaagaagttactggagaagttgagagaagagttgtt
gctcagcttctaacgctaatggacggtttagaggcgagggggcaagtgatagttatagga
gctacaaacagacccgacgctattgatccagctctgagaagaccgggcagatttgacaga
gaaatagagataggagttcccgacagagagggaaggaaggagattcttcagattcacacg
aggggaatgccgatagagccggattacaatagggatgacgttatcaaagttctgaagcag
ctaaaagaggagaaaagattcgaggaaaaagaacttgaggaactgattgcaaaaatagaa
aaagcgaaggaagatgaaataaagaagatacttgaggagaaagaaagcatattcaacgaa
gtcagaaacaggctgatcgatttgatgctcgaagagctcgcagatcttactgttggcttc
gtcggagcagatttggcagctctcgctaaggaagcggcgatgcacgctttgaggaagaga
attgagagtggagaaatagacgtcgaagcagaagagatccccgaagaggttttagagaac
ctgaaggttacgaaagaggacttcttggaagctctgaagaacatagagccttcggcgatg
agagaagttctcgtggaagttccgaaggttacctggaacgacataggcggattggagcat
gcgaagcaggagttgagggaggctgtggaatggccgttcaagtatccggagctgtttaaa
gcggtaggaataaagccgcctaagggtattctcctctacggtcctccgggaaccggtaag
actttgcttgctaaagctgtggctaacgagagtaacgcgaacttcataagcgtcaaaggt
ccggagcttctgagcaagtgggttggagagagcgagaagcacgttagggaaatgttcaga
aaagcgaggcaagttgctccctgcgttctcttcttcgacgaaatagatagcttagcacca
aggaggggaaccggcggagacacccacgtgacagaaagagttgtaagccagcttctcacg
gagctcgacggtttggaggagctgaaagatgttgtggtaatagcggcaaccaacagacca
gatatgatcgatccagctttactaagaccgggaaggcttgagaggcacatatacattcct
cctccagatgaaaaagcgaggcttgagatattcaagattcacacgagaggaatgcccctc
gacgaggacgtaaatcttgaggagctcgccaagaaaactgaagggtacagcggagctgac
atagaggcggtttgcagagaggctggaatgcttgcgataagagaggctatagccaatgtt
aagagtgaggaagaagttaaagaagctgcaagaaaaataaaagtttcgaagaggcatttc
gaagaggctttgagaaagatcaagccgagtttgacgaaggaggatattgagaggtacgag
aagatagttaaagatttccagaaaatgtacgtgtga |
|---|
