Ferroglobus placidus: Ferp_0270
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Entry
Ferp_0270 CDS
T01172
Name
(GenBank) exosome complex RNA-binding protein Csl4
KO
K07573
exosome complex component CSL4
Organism
fpl
Ferroglobus placidus
Pathway
fpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ferp_0270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpl03019
]
Ferp_0270
Messenger RNA biogenesis [BR:
fpl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Ferp_0270
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Ferp_0270
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Motif
Pfam:
ECR1_N
ECR1_N_2
S1
EXOSC1
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
ADC64451
UniProt:
D3S1Z4
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All DBs
Position
235452..235991
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AA seq
179 aa
AA seq
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MRAFPGDYLGCSEEFLAGEGVYEEDGKIYAAVAGKVVVKDRKISIKPEKEIPKIEKGDEV
IGKVVDVKKKFALVELLKKVNMNRSPPYYDLALLPASEISEKFVEDVSEFLSHEDIILGR
VIDENLRISIKGKNYGVISTKCSCGGELILEEDKLKCSKCGKTNRKKISSYYGGAFEWR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagagcatttcccggagattatctcggatgtagcgaggaatttttagctggagaagga
gtttacgaagaagacggaaaaatttacgcagccgtagccggaaaggttgtcgtaaaagat
agaaagatttcgataaaaccggaaaaggagattccaaaaatagagaagggtgacgaagtt
atagggaaagttgtagatgtgaagaaaaagttcgccctcgttgagttgttaaaaaaggtt
aacatgaacaggtctcctccttactacgatttggctttgcttccagcttcggaaatttcg
gaaaaatttgttgaagacgtaagcgagtttttgagccacgaagacataatcctcggcaga
gttatagacgaaaatctgcgaatttcgattaaagggaaaaattacggagttataagcacg
aagtgctcctgcggcggagagctaattcttgaagaggataagcttaaatgtagtaagtgc
ggcaaaacaaacaggaagaagatttcaagctactacggaggtgcgttcgaatggagataa
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