Ferroglobus placidus: Ferp_0555
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Entry
Ferp_0555 CDS
T01172
Name
(GenBank) Transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
fpl
Ferroglobus placidus
Pathway
fpl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Ferp_0555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpl03021
]
Ferp_0555
Transcription machinery [BR:
fpl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Ferp_0555
Prokaryotic type
Archaeal type
TFB
Ferp_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_tTFIIB
Lar_restr_allev
Ribosomal_S27e
Auto_anti-p27
A2L_zn_ribbon
Zn_ribbon_LysW
Zn_ribbon_RRN7
Sigma70_r4
DUF5817
Motif
Other DBs
NCBI-ProteinID:
ADC64728
UniProt:
D3S395
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All DBs
Position
476788..477828
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AA seq
346 aa
AA seq
DB search
METAGRLKAGLVDRSKNARGGESEGIGVNENRKSGRSKSVNDGGGWSGEDGTCPECGSPR
LVTDHSRGEVFCQDCGIVVEDARLDYGPEWRSYDSERGMQRARAGPPVVLTLHDKGFTTT
IGNDRDSHGNPLSPKTRIQFTRLRKWQSKIRTNSSAERNLVRSLMELERITSSLGLPKSI
TERAALIYRRVVSNNLTRGRCIDSIVAAAVYAACREAGLPRTLDEVAAHSSVDKRSVGRA
YRFLARTLGLKPAPITSTDYVPKICAALGVSGEVQERALEIVNEAEKSMVSRSPAGVAAA
AVYIASILLGERRTQREVAGVAGVTEVTIRNCYKMITDRLGIELLL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcaggcaggttgaaagcagggctcgtggacaggagtaagaacgctagagga
ggtgaaagtgaaggaataggtgtgaatgagaacagaaagagtggaaggagcaagagcgtg
aatgatggtgggggatggagtggagaagacggtacatgcccggagtgcggaagcccgaga
cttgtcacggaccacagtcgcggagaggttttctgccaggactgcgggattgttgttgaa
gatgctcgccttgactacggcccggagtggaggtcatatgacagtgagcgtggaatgcag
agggcaagggcagggcctccagttgtgctcactctccatgacaaggggtttaccacaaca
atagggaacgatagagacagccacggcaatccactctcccccaaaacaagaatccagttt
accagactgagaaagtggcagagcaaaatcagaacaaacagctctgcagagaggaatctt
gtacgatcactgatggagcttgagagaatcacgtcttcccttgggctgcctaaaagcata
acggagagggcggcactcatctacagaagggtagtcagtaataacctgacgagggggagg
tgtatagacagcattgttgccgctgcagtgtacgcagcatgcagggaggcaggactgccg
aggacgctggatgaagttgcagcccactccagtgtggataaaaggtctgttggaagagcg
tacagattccttgcaagaacgctcgggctgaagcctgctccaatcacctctacagactac
gtgccgaagatctgcgcagcacttggagtgagcggggaggtgcaggagagggctctggaa
atcgtaaatgaggctgagaaaagcatggttagcagaagtccagcaggtgtggctgcggct
gcagtttacattgcatcaatcctgcttggagagaggagaacgcagagggaagtggcagga
gttgcaggagtcacagaagtcacgataaggaactgctacaagatgataactgacagactg
ggaatagagctgctcctttag
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