Ferroglobus placidus: Ferp_1162
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Entry
Ferp_1162 CDS
T01172
Name
(GenBank) rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fpl
Ferroglobus placidus
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpl03016
]
Ferp_1162
Enzymes [BR:
fpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Ferp_1162
Transfer RNA biogenesis [BR:
fpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Ferp_1162
Prokaryotic type
Ferp_1162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
ADC65321
UniProt:
D3RXV8
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All DBs
Position
1005543..1006550
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AA seq
335 aa
AA seq
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MEINDRFLVKDEAKPSEEYGCYPYNRPIQEYIRKGFVLIDKPKGPTSHEVVVWVRKILEV
EKTGHAGTLDPKVTGVLPVFIEQATKLVQFLQGSEKEYVALMRLHGDVSERELRKVFELF
KGKIYQRPPLKSAVKKRLRVREIYDIEILEIDGRDVLFRVVCEAGTYVRKLCTDIGEILG
VGAHMQELRRIRTGIFTEEKCYTLQDLLDAYIFWKEEGEEEYLREIIQPMELAVANIPKI
IIKDTAVDAICHGASLTAKGVAYVEKNVKKGERVAIFTLKQELVAIGRSNYDAEDILKIR
GGIVAEIERVIMERGTYPSYWKKKKEKQVTPERSF
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaacgataggtttctcgtaaaagatgaagccaaaccttcagaagagtacgga
tgctacccctacaacagacctattcaggagtatataagaaaggggttcgttctaatagac
aagccgaagggaccaacgagtcacgaggttgttgtctgggttagaaagattctcgaagtt
gaaaaaacgggacacgccggaactttagatccgaaggttacgggtgttttgccggtattc
atagagcaggctacgaagctcgttcagtttttacaaggttcggagaaggaatacgtggct
ttaatgagactgcacggtgacgtaagcgaaagggagctaagaaaagttttcgagcttttt
aaaggaaaaatctaccagcgacctccgctaaagtcggctgtgaaaaagaggttaagagtt
agagaaatctacgacatcgaaatactggagatagatgggagggacgttctctttagagtc
gtctgcgaggctggaacttacgttagaaagctctgcacagacataggtgaaattctcggt
gttggagcccacatgcaggagctcaggagaataagaacggggatattcaccgaagaaaaa
tgctacaccctccaagatctacttgatgcttacatattctggaaggaggaaggagaggag
gagtacctcagagagataatccagccgatggagctggctgtcgcaaacataccgaagata
ataattaaagatacagccgtcgatgccatctgccacggtgcgagcctaacggcgaaggga
gtcgcttacgtcgaaaagaacgtgaaaaaaggagagagagttgcaatattcacgctaaag
caggaactcgttgccatagggagatccaattacgacgctgaagacatattaaaaataagg
ggaggcatcgttgcggaaatagagagggttattatggaaagaggcacgtatccctcctac
tggaagaaaaagaaagaaaaacaagttactccagaacgatctttctga
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