Ferroglobus placidus: Ferp_1984
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Entry
Ferp_1984 CDS
T01172
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
fpl
Ferroglobus placidus
Pathway
fpl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Ferp_1984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpl03019
]
Ferp_1984
03012 Translation factors [BR:
fpl03012
]
Ferp_1984
Messenger RNA biogenesis [BR:
fpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Ferp_1984
Translation factors [BR:
fpl03012
]
Eukaryotic type
Release factors
Ferp_1984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
PG_isomerase_N
Zn_ribbon_10
Desulfoferrod_N
zf_UBZ
Zn_ribbon_Brz
HVO_2753_ZBP
zf_Tbcl_2
Zn_ribbon_3
DUF7560
DUF7575
Motif
Other DBs
NCBI-ProteinID:
ADC66121
UniProt:
D3S058
LinkDB
All DBs
Position
complement(1717097..1718314)
Genome browser
AA seq
405 aa
AA seq
DB search
MDAKLKYEFKRKLEELEKYKGRGTELITLYIPPNKNIADVANQLRNELSQASNIKSKQTR
TNVLAGLEAILQRLKMFKKPPENGMVIISGVIDLGGGKEKHITEIIIPPEPVPMYKYHCD
SRFYLEPLKEMLKEKKVYGLIVLDRREATIGVLRGNRIEVLAHATSNVPGKHRQGGQSSV
RFERLREIAIHEFYKRVGDKANEAFLPIKDELEGILIGGPSPTKEEFYEGEYLHHELQRK
VLGLFDVGYTDESGLYELVEKAEDVLQELDIIKEKKIMNRFLKEVVKDGLAAYGEEEVRK
YLSYGAVDTLLISEDLRYERVTYRCPKCGKTVEVTLKDNTSKKMYCENDNVEMEEVERKD
VVMELAELAEASGAKVVFVSTESEEGAMLMNAFGGIAAILRYKVE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagcttaaatacgagttcaagaggaagctcgaagagctcgaaaaatacaaa
ggtagaggaactgaactcatcaccctttacattcctccaaataaaaatatagcagacgtt
gcaaaccagcttagaaacgagctcagccaagcttcgaacatcaaatcgaagcagacgaga
acgaacgttttagctgggcttgaggctattctgcagaggttgaagatgttcaaaaagcca
cctgagaacggaatggtgataataagtggagtaatagacttgggaggaggaaaagagaag
cacataaccgaaataataattccccccgagccggttcccatgtacaagtaccactgcgat
tcgaggttttatcttgaaccgctaaaagaaatgctgaaggagaagaaagtttacggctta
atagtgctcgatagaagagaggcaacgataggtgttttgaggggaaacagaattgaagtt
ctcgcccacgccacttccaacgttcccgggaagcacaggcagggagggcagagcagcgtc
agattcgaaaggctgagagaaattgctatccacgagttctacaaaagagttggagacaaa
gcgaacgaggcattccttccgattaaagacgaactcgaaggaatattgataggaggtccc
tctcctacgaaagaggagttttacgagggagaatacttgcatcacgagcttcagaggaaa
gttctcgggcttttcgacgtcggctatacagacgaaagcggtttgtacgagcttgtggaa
aaagcagaagatgttcttcaggagctggacataataaaggagaagaagataatgaacagg
ttcctcaaagaagtcgtcaaagacggattggctgcttatggagaggaagaggtgaggaaa
taccttagctacggagcagtagatacactactaatctccgaagacctgagatacgaaaga
gtaacctacagatgcccgaagtgtggcaaaactgtagaagtgactctgaaggacaacacg
agcaagaagatgtactgcgagaatgacaacgtggaaatggaggaagttgagaggaaagac
gtcgttatggagcttgccgagcttgctgaagcttctggagcaaaggtcgttttcgtctca
actgaatcagaggaaggagctatgctgatgaacgcttttggaggaatagctgcaatactc
agatacaaggtggagtaa
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