Ferroglobus placidus: Ferp_2177
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Entry
Ferp_2177 CDS
T01172
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
fpl
Ferroglobus placidus
Pathway
fpl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fpl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Ferp_2177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpl03019
]
Ferp_2177
03009 Ribosome biogenesis [BR:
fpl03009
]
Ferp_2177
04131 Membrane trafficking [BR:
fpl04131
]
Ferp_2177
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fpl04147
]
Ferp_2177
Messenger RNA biogenesis [BR:
fpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Ferp_2177
Ribosome biogenesis [BR:
fpl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Ferp_2177
Membrane trafficking [BR:
fpl04131
]
SNARE
SNARE associated proteins
Others
Ferp_2177
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Ferp_2177
Exosome [BR:
fpl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Ferp_2177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
TIP49
AAA_5
CDC48_2
AAA_14
AAA_22
Vps4_C
AAA_28
nSTAND3
RNA_helicase
AAA_33
AAA_7
Mg_chelatase
AAA_17
DUF815
Parvo_NS1
NPHP3_N
AAA_18
AAA_24
SLFN-g3_helicase
IstB_IS21
Sigma54_activat
ABC_tran
AAA_3
ATPase
AAA_19
Zeta_toxin
TsaE
AAA_lid_PRS2_C
NB-ARC
Sigma54_activ_2
ResIII
AAA_30
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ADC66306
UniProt:
D3S0R5
LinkDB
All DBs
Position
1883994..1886411
Genome browser
AA seq
805 aa
AA seq
DB search
MELLLKVNQAYPSDSGRGIARLDPESMFRLNISPGDIIEIEGRRKTVAKVWRAPKRDWGR
GIIRIDRFIRENAGVNIGDTVKVRKAEYSIARQVILAPLKKLDFKVYGADIGEYLKHQLL
KRPVMEGDLVPIVGAPAFTGFGKYTQNQATVLVAVKTEPKGAVIIDDQTHVVFRERPVKG
FERFGKAGVTYEDIGGLKEELQKVREVIELPLKYPEIFQRLGIEPPKGVLLYGPPGTGKT
LIAKAVANEIGATFLTINGPEIMSKFYGESEQRLREIFEKAKENAPSIIFIDEIDAIAPR
RDEVTGEVERRVVAQLLTLMDGLEERGQVIVIGATNRIEAVDPALRRPGRFDREIEIGVP
DREGRFEILQIHTRNMPLEPEYSREFVLEALNSLKNLLKEEGDSRLSQIEFIIEEVKEAE
RKEEVKAIIENLFPEELRPDLEREIIKAMLRHLADQTHGFVGADIEALCKEAAMKALRRY
LPRIDLNGDELPVELLEEMKVTFDDFKEALKEIEPSAMREVLVEVPKVTWEDVGGLEDVK
QEVIEAVEWPLKYPEKFKKFGIKPPKGVLLYGPPGTGKTLIAKAVANESEANFISVKGSE
LLSKWLGESEKAVRKIFRKAKQVAPCIIFFDEIDAIAQMRGIDEGSRAVERVVNQLLTEM
DGLEELEGVIVIGATNRPDIIDPALLRPGRFDRLVYVRPPDKKSRYAIFKIHTRNMPLAE
DVDLEELAELTEGYVGADIEAVCREAVMLALRENINAEKVEMRHFYQAIKKIKPSVNEAM
LRFYEKFEERVKVEPKQAKTIIGYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaactgctactcaaagtaaatcaagcttaccccagtgactccggaagaggtatagca
agactcgatccggaatcgatgtttaggctgaacatttcaccgggagacataatagaaata
gagggaagaaggaaaacggtcgccaaggtctggagagccccaaaaagagattggggtagg
gggataataagaatagatcgctttatcagagagaacgcaggtgtaaacataggagatacc
gtcaaagttagaaaagcggaatattcgatagccagacaggtcattcttgcccctctaaaa
aagctcgacttcaaggtttacggggctgatataggggagtatctcaagcatcagctcctc
aagagacctgttatggaaggagacctcgttccgatcgtcggagctccagcttttacggga
tttggcaaatacacccaaaatcaggctacagtccttgttgcggtaaagacggagccgaag
ggagcggtgataatagacgatcagactcacgttgtgtttagagagcgcccagtcaaaggt
ttcgaaagatttggaaaagccggagtcacctacgaggatataggtgggcttaaagaggag
cttcagaaagtcagggaggttatagagcttccgctcaagtatccggagatattccaaaga
ctcggcatagagccgcccaagggagttttgctgtacggaccgccgggaactggtaaaacg
ctaatagccaaggctgtggctaacgaaataggagcaactttcttgacgataaacggtccc
gaaattatgagcaagttctacggagagagcgagcagaggcttagggagattttcgaaaaa
gctaaggagaacgcaccaagtataattttcatagatgagatcgacgcgatagctccgagg
agagacgaagttactggggaagttgagaggagggtcgttgctcagctcttaacgttaatg
gacggtctcgaagagagagggcaggttatagttatcggagcaaccaacagaatcgaagcc
gtcgatccggctctgagaagaccggggagatttgacagagaaatagagataggcgttccc
gacagagaagggagattcgagattcttcagattcacacgaggaacatgcctctcgagcca
gagtactcaagagaattcgtgctcgaagctttaaactctcttaaaaacttattaaaggaa
gagggagactcaaggctctctcagatcgaattcataatagaagaagtcaaggaggctgaa
aggaaagaagaggtcaaagctataatcgaaaacctcttcccagaagagctcagacctgac
ttggaaagggagataattaaggctatgctaagacatttagcagaccaaactcacggattc
gttggggctgacatagaggcgttgtgtaaagaggcggcgatgaaagctctgaggaggtat
ctgccgaggatagacctgaacggtgatgagttgccagtggagctgcttgaggaaatgaaa
gtcacgttcgacgactttaaggaggctttgaaagaaatagaaccttcggcgatgagggaa
gttctcgtggaagttccgaaagttacgtgggaagatgtcggcgggttagaagatgttaag
caagaggttatcgaagcggtggaatggccgttgaagtatccggagaaatttaagaagttc
gggatcaaaccgcctaagggagttttgctgtacggaccgccaggaaccggtaaaacgcta
atagccaaggctgtggctaacgagagcgaagcgaacttcataagcgtgaagggtagcgag
cttctgagcaagtggctcggagagagcgaaaaagccgtgaggaagatcttcaggaaagcg
aagcaagttgctccttgcataatcttcttcgacgaaattgacgccatagctcagatgaga
gggattgatgaggggagtagagctgttgaaagggtggttaaccagcttttaactgagatg
gacggtctcgaagagcttgaaggagtcatagttatcggagcaaccaacagaccagacata
atcgatcccgctttactaaggccgggaaggttcgacaggctggtttacgtaagaccacca
gacaaaaagagcaggtacgccatcttcaagatccacacaagaaatatgcctttagccgaa
gacgtcgatctcgaggagcttgcggagttaacggaaggctacgtaggtgctgacatagag
gcagtttgcagagaggctgtaatgttagctttgagggagaacataaacgctgaaaaagtc
gaaatgaggcacttttatcaggctataaagaagattaagccgagcgtaaacgaggctatg
ctgaggttctacgagaagttcgaagagagggtgaaagtggagccgaagcaggcgaagacg
ataatcggatacggttag
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