Flavonifractor plautii: A4U99_03300
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Entry
A4U99_03300 CDS
T04429
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
fpla
Flavonifractor plautii
Pathway
fpla02020
Two-component system
fpla02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpla00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A4U99_03300
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A4U99_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpla03021
]
A4U99_03300
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
fpla02035
]
A4U99_03300
Transcription machinery [BR:
fpla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A4U99_03300
Bacterial motility proteins [BR:
fpla02035
]
Flagellar system
Flagellar assembly proteins
Stator
A4U99_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_37
HTH_10
MarR_2
HTH_23
UPF0122
HTH_Tnp_ISL3
HTH_3
HTH_24
KORA
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ANU40142
UniProt:
A0A174RSB7
LinkDB
All DBs
Position
707245..708066
Genome browser
AA seq
273 aa
AA seq
DB search
MGKGICMNKLKQMETALSPGGGQQAVDQMDNQTLLLRYKETGDMELKWALVLRYTDLVRR
IAIQTCGLFSGFTQLDDVIHEGILVLLSAVDKYDPEKEVKFEAYIAKRLRGMVIDLVRKQ
DWIPRRVRQKATRLKRAAEELSIELGHTPSDQEMADYLKLSQKDYEELLSETAFSNLMSF
EVLLDTYGNVTGKALSGNPPEDAYQQKELHEVLRRGIASLRENERLVLSLYYEKELTMKE
IAQVLGVSAPRISQIHNRAIQRLQAYMKQYIGA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggggaagggtatctgcatgaataagttaaaacagatggaaacggccctatcccccggc
ggaggtcagcaggcggtcgaccagatggacaatcagacccttctgctgcgctacaaggag
acgggggatatggagctgaagtgggccctggtgctgcggtataccgatctggtacgccgg
attgcgattcagacctgcgggctgttcagcgggtttacccagctggatgatgtgatccat
gagggaattttggttctgctcagcgctgtggacaagtatgaccccgaaaaggaggtcaag
ttcgaggcgtacatcgcaaagcggctgcggggaatggtgatcgacctggtacgcaagcag
gactggattccgcggagggtccggcagaaggccacccggctgaagcgggcggctgaggag
ctgtccatagagctgggccatacccccagcgatcaggagatggcagactacctgaagctc
agccagaaggactatgaggagctcctctctgaaacggcgttttccaacctgatgtctttc
gaggtgcttttggacacctatgggaatgtaaccggcaaggcactgtccggcaatccgccg
gaggatgcttatcagcaaaaggagctgcacgaggtgctgcgccggggaatcgcctccctg
cgggagaatgagcggctggtgctctccctgtattatgaaaaagagctgaccatgaaggag
attgcacaggtccttggggtcagcgcgccgcgtatttcacaaatccataaccgggccatt
cagcggctccaggcctacatgaagcagtacataggagcgtag
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