Flavonifractor plautii: A4U99_17915
Help
Entry
A4U99_17915 CDS
T04429
Name
(GenBank) helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fpla
Flavonifractor plautii
Pathway
fpla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4U99_17915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpla03019
]
A4U99_17915
Enzymes [BR:
fpla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A4U99_17915
Messenger RNA biogenesis [BR:
fpla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A4U99_17915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HP0268
HI1480
Motif
Other DBs
NCBI-ProteinID:
ANU42830
UniProt:
A0AAX1KEA9
LinkDB
All DBs
Position
3765139..3766878
Genome browser
AA seq
579 aa
AA seq
DB search
MTFQELGLNEPILRALADQGYEQPSPIQAKAIPPALTGRDVLGCAQTGTGKTCAFAAPIL
QQLSGRKAQGRPIRALILTPTRELALQIQESFEAYGKYLPLRSTVIFGGVGQAPQVERLK
NGVDILVATPGRLGDLYGQKLIDLSRLEIFVLDEADRMLDMGFIHDVRRILGWLPAQKQT
LFFSATMPPEVQGLVDSLLHNPAKVAVNPISSPVEVIDQKLYYVDRGNKTRLLAALIREL
SVKNALVFTRTKHGANKVAGDLVKAGISAAAIHGNKSQTARQQALADFKSGAVQVLVATD
IAARGLDIEELSHVFNYNLPDVPETYVHRIGRTGRAGRGGTAISFCDINEKDELKAIEKL
IGRAIPVVEGHPWPMEVLEPLPRDKKGRMVNPEDAEARAAAKERRRQRDAANKAAAEARK
AKANQKVLEQPPQPEPAGETSAKKRRKRGQRNSATLEEALTATAPARPVQAEFADFHKPD
PLASDVIMDATARLLAPRGRAQAAPKKDKPVEQPAKKRKKAARPPEPPAKPEPQAARKRK
GSGRHGGRGRPPEVTLRTNGQKDSTEQPSLMKPYYLSHD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaagaactcggcctcaacgagcccatcctgcgggccctggccgaccagggc
tacgagcagccctctcccatccaggcaaaagccattccccccgcgctgaccggccgggac
gtgctgggctgcgcccagaccggcaccggaaagacctgcgccttcgccgcccccattctc
cagcagcttagcggccgtaaggcccagggccgccccatccgggccctgatcctcaccccc
acccgggagctggccctccagatccaggagagctttgaggcctatggcaagtacctgccc
ctgcgctccaccgtcatcttcggcggcgtgggccaggccccccaggtggagcggctgaaa
aatggcgtggacatcctggtggccacccccggccgcctgggcgacctctacggccagaag
ctcatcgacctgtcccggctggagatcttcgtgctggacgaggccgaccggatgctggac
atgggcttcattcacgacgtgcgccgcatccttggctggctgcccgcccaaaagcagacc
ctctttttctccgccactatgccccccgaggtgcaggggctggtggactccctgctgcac
aaccccgccaaggtggcggtcaaccccatctcctccccggtggaggtgatcgaccagaag
ctctactacgtggaccgcggcaacaagaccaggctgctcgccgccctcatccgggagctg
agcgtgaaaaacgccctggtgtttacccgcaccaagcacggggccaacaaggtggccggg
gatctggtcaaggcgggtatctccgccgccgccatccacggcaacaagagccagaccgcc
cgacagcaggccctggccgacttcaagagcggcgcggtgcaggtcctggtggctaccgac
atcgccgcccggggcctggacattgaggagctctcccacgtgttcaactacaacctgccc
gacgtaccggagacctacgtccaccgcatcggccgcaccggccgggccgggcggggcggc
accgccatctccttctgcgacatcaacgagaaggacgagctcaaggccatcgagaagctc
atcggccgcgccatccctgtggtggagggccacccctggcccatggaggtgctggagccc
ctgccccgcgacaagaagggccggatggtaaatccagaggacgccgaggcccgggccgcc
gccaaggagcgccgccgccagcgggatgcggccaacaaggccgccgccgaggcccgaaag
gccaaggccaaccaaaaggtactggagcagcctccccagccggagccagccggggagacc
tccgccaaaaagcgccgcaagcggggccagcgcaacagcgccaccctggaggaggccctg
acggccactgcccccgcccggccggttcaggcggaatttgccgacttccacaagcccgac
cccctggccagcgacgtgatcatggacgccaccgcccgcctgctggcccctcgcggccgg
gcccaggccgcaccgaaaaaggacaaaccagttgaacagcccgctaaaaagcggaagaag
gccgccaggcccccggaaccccctgcgaagccggagccccaggcggcgcggaagcgcaag
ggcagcggacgccacggcggccggggccgtcccccggaggtcaccctgcgcaccaatggg
cagaaggactccaccgagcagcccagcctgatgaagccctactacctgagccatgactaa
DBGET
integrated database retrieval system
