Flavobacterium plurextorum: NLG42_02820
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Entry
NLG42_02820 CDS
T08840
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu02020
Two-component system
fplu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NLG42_02820 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NLG42_02820 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fplu03021
]
NLG42_02820 (rpoN)
Transcription machinery [BR:
fplu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NLG42_02820 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
UUW09739
LinkDB
All DBs
Position
589661..591121
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AA seq
486 aa
AA seq
DB search
MLKQFLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRLLEEMNENPALEAGKEDEYEADEFA
NEDYDDYDDAESDRIEADDINIDEYLSDDDTPDYKTQVNNYSDDEERETPFASPISFHQD
LINQLNTFILNDEEREIAEFLVGSIDDMGYIRRSVPDIVDDMAFTQGIYTDEAMVEKMLT
VIHELEPSGVGARDLQECLLLQLKHKTPTEYVDLAIDIIENQFDAFTKKHYDKLLQKYSV
SNEQLKKAIHEIERLNPKPGGSFTGNNKVTENVVPDFAIRIVDGELELTLNGRNAPSLHV
SKDYQEMMQTYKDSRDKSSAQKDAVQFIKQKLDSAKWFIDAIRQRQETLFVTMNAIMHYQ
EEYFLDGDETKLKPMILKDIADMVGLDISTISRVANSKYVETPYGTKLIKEFFSEAMKND
QGEDVSTLEIKKILKNTIEEEDKKKPLPDDQLAEILKEKGYPIARRTIAKYREQLDIPVA
RMRKKI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcaatttttaaatttaaaattatcccaaaaattatctccacagcaaattcag
ctgatgaagttaattcaattgcctacgcaagcttttgaacagcgtttattagaagaaatg
aacgaaaatccagctcttgaagctggtaaagaagatgaatatgaagctgatgaattcgct
aatgaagattacgacgattatgatgatgcagaatcggacagaatcgaagctgatgacatt
aacattgacgaatatctaagcgacgacgatacacctgattacaaaactcaagtgaataat
tacagtgatgatgaagaacgcgaaacaccttttgcttcgccaattagctttcatcaggat
ttaatcaatcagttgaatacttttattttgaatgatgaagaacgcgaaatcgccgaattc
cttgttggaagtattgatgacatgggttacatccgcagaagcgttccagacatcgtagac
gacatggcttttactcagggaatttatactgacgaagcaatggtcgaaaaaatgctgact
gtaattcacgaacttgaaccttcgggagttggagcacgcgatttgcaggaatgcttatta
cttcaattaaagcataaaaccccaacagaatatgttgatttagcgatcgatattatcgaa
aaccagtttgatgcttttacgaagaaacattacgataaacttttacagaaatacagcgtt
tcgaacgaacagcttaaaaaagcgattcacgaaatcgaaagattaaacccgaaaccggga
ggttcttttacaggaaataataaagtcactgaaaatgtagttccggattttgccatcaga
attgttgacggtgaattagaattgactttaaacggaagaaatgctccttctctgcacgtt
tctaaagattatcaagaaatgatgcagacgtataaagattctcgtgataaatcatctgct
cagaaagatgcagttcagtttatcaaacaaaaactagattcggctaaatggtttatcgac
gcaatcagacaacgtcaggaaacgctttttgtaacgatgaatgcgattatgcattatcag
gaagaatatttcttagacggtgacgaaaccaaacttaaaccaatgatcttaaaagacatt
gccgatatggttggtttggatatttcgacgatttcgcgtgttgccaacagtaaatatgtc
gaaacaccatatggaacaaaactgattaaagaattcttttctgaagccatgaaaaatgac
caaggagaagatgtttctactttagaaatcaaaaagattcttaagaatacaattgaagaa
gaagacaaaaagaaaccacttccagacgatcaattggctgaaattttaaaagaaaaagga
tatccaatcgcaagaagaacaattgcaaaataccgtgaacaactagatattccagtggca
agaatgagaaagaaaatttag
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integrated database retrieval system
