Flavobacterium plurextorum: NLG42_02850
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Entry
NLG42_02850 CDS
T08840
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03410
Base excision repair
fplu03430
Mismatch repair
fplu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLG42_02850 (recJ)
03430 Mismatch repair
NLG42_02850 (recJ)
03440 Homologous recombination
NLG42_02850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_02850 (recJ)
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NLG42_02850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NLG42_02850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NLG42_02850 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
LsmAD
Motif
Other DBs
NCBI-ProteinID:
UUW09744
LinkDB
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Position
595200..596900
Genome browser
AA seq
566 aa
AA seq
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MRWTLKPKPSQDKIKHLAQALNVEDFVATLLIQRGIETFEDAKNFFRPSLEHLHDPYLMK
DMEKAVARIELAIENQENILVFGDYDVDGTTAVSLVSSYLKSHYPNIATYIPDRYDEGYG
ISFKGIDFADDNGFSLIIALDCGIKSIDHIAYAKAKNIDFIVCDHHRPGEFLPDAVAILD
PKREDCTYPYDELCGCGVGFKLIQALGQNRNETIEDLVPYLDLVATAIAADIVPITGENR
VLAYFGLKVINSNPRPGIKALVHQVKKTVLDITDVVFIISPRINAAGRIKHGNHAVELLT
EFDFDQAQQFASEIEQYNADRKDLDKKITKEAFLQITENNEEERFSTVVFQEDWHKGVIG
IVASRLIETYYRPTLVFTKSGDKYAASARSVKGFDVYNALDACAEHLEQFGGHMYAAGMT
LKAENYQIFKDAFEKQVSSTISPEMRTPEIEIDAEINFSDITPKLIRILKQFEPFGPQNM
TPVFMTKNIKDTGYAKTLGSEEEHLRLFVKQSNSDGIAAIGFGLGKKLSIAQNQNLFQLA
YSLAENEWNGTISTQLMLKDIRTNDN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggactttaaaaccaaaaccttctcaagataaaatcaaacatttggcgcaagcc
ttaaatgtagaagattttgttgcaacacttttgattcagcgcggcattgaaacttttgaa
gatgctaaaaatttctttcgcccatctttagaacatcttcacgatccttatttgatgaaa
gacatggagaaggcggttgcaagaatagaattggcaattgaaaatcaggaaaatatttta
gtttttggtgattatgatgttgacggaacaacggcggtttctttggtttcatcgtattta
aaatcacattatccaaatattgcaacttatattccggatcgttatgatgaaggttacgga
atctcttttaaaggaattgactttgctgacgataacggattttcattgattattgcactc
gattgcggcataaaatccatagaccatatcgcttacgcgaaagcaaaaaatatcgatttt
attgtttgtgatcaccacagacctggtgaatttcttccagatgcggttgcaattcttgat
ccaaaaagagaagactgcacttatccgtatgatgagttatgcggctgtggagttggtttt
aaattgattcaggctttaggccaaaaccgaaatgaaactatcgaggatttagttccatat
ctagatttggttgcaactgcaattgctgcggatattgttcctattacaggagaaaatcgt
gttttagcttatttcggtttgaaagtaattaacagtaatccaagacctggtattaaagct
ttagttcatcaggttaaaaagacagttttagatattaccgatgttgtttttattatttct
ccaagaataaacgctgcgggaagaatcaagcacggaaatcatgctgttgaattattaacc
gaatttgattttgatcaagcacagcagtttgcatctgaaattgaacaatataatgctgat
cgaaaagatctagataaaaaaattacaaaagaagcttttcttcaaattacagaaaacaat
gaggaagaacgtttttctaccgttgtatttcaagaagactggcacaaaggtgttattgga
attgttgcttctcgattgattgaaacgtattatcgaccaactttagtttttactaaaagc
ggagataaatatgcggcttctgcccgatctgtaaaaggttttgatgtttacaatgcatta
gatgcctgcgcagaacatttggaacaatttggaggtcatatgtacgccgcgggaatgact
ttaaaagctgaaaattatcagatttttaaagacgcttttgaaaaacaggtttcatcaact
atttcacctgaaatgcgaactcctgaaatcgaaattgatgccgaaattaatttctctgat
atcactccaaaactcatccgcattctaaaacaatttgaaccttttggtccgcagaacatg
acgccggttttcatgactaaaaacataaaagatactggttatgccaaaactttaggttct
gaggaggaacatttaaggctttttgtaaaacaatctaattcagatggaattgcagcaatt
ggctttggactaggaaaaaaactaagtatagcacaaaatcagaatctgtttcagctggct
tattctttagctgaaaacgaatggaacggaaccatatcaacacagcttatgctgaaagac
attagaacaaatgacaactaa
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