Flavobacterium plurextorum: NLG42_06215
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Entry
NLG42_06215 CDS
T08840
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03030
DNA replication
fplu03430
Mismatch repair
fplu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLG42_06215 (dnaE)
03430 Mismatch repair
NLG42_06215 (dnaE)
03440 Homologous recombination
NLG42_06215 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fplu03032
]
NLG42_06215 (dnaE)
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_06215 (dnaE)
Enzymes [BR:
fplu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLG42_06215 (dnaE)
DNA replication proteins [BR:
fplu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLG42_06215 (dnaE)
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLG42_06215 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
SRP14
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
UUW10397
LinkDB
All DBs
Position
1331345..1335877
Genome browser
AA seq
1510 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRCIQIAWQLHDEMGQLIEHQDYLVKPDGFNIPY
DAERIHGISTELAEADGISLAEVLEKFNIALSKTKFIVGQNLGFDVNIMGAEFHRMGVDS
PMSTMPVLDTCTEVTASLLQLPGGRGGRFKLPTLTELHSYLFDKPFAEAHNATADVEATT
RCFLELIRREVFTKEELDVPKEYFKEFQARNPQEFPLIGLKHINLKAASDKIREQLKALE
SVGKEPAVSHSDREDFKAAKYSHLHNHTQFSVLQSTIGIGNIVSATAKNGMPAVAMTDTG
NMMGAFHFVSAVMNHNKAASGKNKALVEAGEEPTETEIKPIVGCEFNVCENHLDKSKKDN
GNQIVLLAKNKNGYHNLAKMSSIAFTNGFYYVPRIDRAIVEKYKEDIMVLSGNLYGEIPS
KILNIGENQAEEALIWWKEQFGDDFYLELMRHNQEDENRVNKTLIEFSQKHNVKLIATNN
TYYLNKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYYKSEEEMKKLFSDIPE
AIINIQEIVDKVEGYSLYRDVLLPKFDIPQEFVVEEDEADGGVRGENAYLRDLTMRGAER
RYGVITESIQERLDFELLTISNSGYPGYFLIVQDFIAEARKMDVSVGPGRGSAAGSAVAY
CLGITNIDPIKYDLLFERFLNPDRISMPDIDIDFDDEGRGRVMDYVINKYGQKQVAQIIT
YGKMATKSAIRDTARVLDLPLFEADRIAKLIPGMMPGKWNLARFLSESEDDVKKALKGAD
EFELVKELIAIANEDDLAGETIQQAKILEGSMRNTGIHACGVIITPSDITNYVPVTTAKD
SDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRTGIDLDPDTFPIDDEETY
ALFQRGETVGIFQYESPGMQKYMKDLKPTVFGDLIAMNALYRPGPIEYIPSFVRRKNGEE
EIKYDLDACEEYLGETYGITVYQEQVMLLSQSLAGFSKGDADVLRKAMGKKQIEVLDKMK
PKFVEQAAAKGHDAKILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAFLKAHYPAEYMA
AVLSNNMNDIKQVSFFMEECKRMGLQVLGPDVNESYYKFTVNDDYAVRFGMGAIKGVGSG
AVETIVENRKDGRYKSIFDLAQRIDLRAANKKAIENLVLAGGFDSFEGTTRAQYFHDDGD
GITFYEKAIRYGSKFQENENSSQVSLFGEASEVQIAEPIIPACEDWSTMEKLAKEKEVVG
IYISGHPLDDFRFEMKYFCNSRLESLKSMNEYVGKNLNFAGIINNVQHRVAKNGKGWAVF
NLEGYDESYEFKIFGEEYLKFRHFLIQNNFAFIKILIKDGWVNHDTGKKSDPRMQFVEIR
QLQDIMEAFAKKLIVLLNIQDLQTEFIHRLSHLFNENKGENSVTFEIMELEKIKRLVEVE
TPADFEESEDAVFEGENEDAAQETKIQEVNEIEEIKVVTKLTMPSRRLKIKISTELLQEL
EKLQVNFKLN
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatattcgataccgaaactactggattaccaaaacgctgggatgctccaata
actgattctgataactggcctcgctgtattcagattgcgtggcagcttcatgacgaaatg
ggacagcttattgagcatcaggattatttggtaaaaccagatggatttaatattccgtat
gatgccgagcgtattcacggtatttcgactgaattagcagaagctgatggaatttcgctg
gcagaagttttggagaaattcaatattgctttaagtaaaactaaatttattgttgggcag
aatctaggtttcgatgttaatattatgggagctgaattccatagaatgggtgtagattcg
ccaatgagtacaatgcctgttttggatacttgtacagaagttacagcttcattattgcag
cttcctggaggtcgtggaggaagattcaaattgccaacattaacagagttacatagttat
ttatttgataaaccttttgcagaagcgcacaacgcaactgccgacgttgaggcaactact
cgttgtttcttggagttaattagaagagaggtttttaccaaagaagaactggatgttcca
aaggaatacttcaaagaatttcaagcaagaaatccgcaggagtttccattaattggatta
aaacacatcaatttaaaagcggcttctgataaaatcagagagcagctaaaagctttagaa
tctgttggtaaagaacctgcagtttcgcattctgacagagaagattttaaagcagcaaaa
tattcgcatttacacaatcatacacagttttcggttcttcaatcgacgatcggaatagga
aatattgtttcggctacagccaaaaacggaatgccggctgttgcaatgacggataccgga
aacatgatgggcgcatttcactttgtgagcgccgttatgaaccacaacaaagcagcatct
ggaaaaaataaagctttggtagaagctggagaagaaccgaccgaaacggagataaaacca
attgtaggctgtgaatttaatgtttgtgaaaatcatttagataaaagcaaaaaagacaac
ggaaaccaaattgtattgttagccaaaaataaaaatggatatcacaacttggctaaaatg
tcttccattgcttttacgaacggattttactatgttcctagaattgatcgcgcgatcgtc
gaaaaatacaaggaagatatcatggttttgtctggaaatttatatggagaaattccgagt
aaaattctgaacattggtgaaaaccaagccgaagaagcattaatttggtggaaagaacaa
tttggtgatgatttttatctggaattgatgcgccataatcaggaagatgaaaatcgcgta
aacaaaaccctgattgaattttcgcaaaagcataatgtaaagctgattgcaaccaataat
acctattatttaaataaagaagatgccaatgcccacgatattttactttgtgtaaaagat
ggtgaaaagcaggcaacgccaattggtcgtggtcgtggttatcgctacggacttccaaat
caggaatattattataagtcagaagaagagatgaaaaaactcttttctgatattcctgaa
gcgattataaacattcaggaaatagtagataaagtagaaggatattcactttatcgtgat
gtattgcttcctaaatttgatattccacaagaatttgttgttgaagaagatgaagctgac
ggaggagttcgaggtgaaaacgcttatctgcgcgatcttacaatgaggggagccgaaaga
agatatggcgtaattacggaatcgattcaggaacgtttggatttcgagttgttaacgatt
tcgaattcaggatatccgggttactttttgattgtacaggattttattgccgaagctaga
aagatggacgtttctgttggtccaggtcgtggatctgcagcgggttctgccgttgcctat
tgcctcggaattacgaatattgaccccattaaatacgatttactttttgagcgttttcta
aatcctgaccgtatatcgatgcccgatattgatatcgattttgatgacgagggtcgtgga
cgtgtaatggattatgtaatcaacaaatacggtcaaaaacaggtagcacagattatcacg
tatggtaaaatggctaccaagtcggcaattcgtgatacggctcgtgtactggatttacct
ttattcgaagccgatagaatcgccaaactgattccaggaatgatgccaggaaaatggaat
ctggcgcgtttcctttctgaatcagaggatgatgttaaaaaagcattaaaaggcgctgat
gaatttgaacttgtaaaggaattaatcgccattgccaatgaagatgatttggcaggagaa
accattcagcaggcaaaaatccttgaagggtcgatgcgaaatacaggaattcacgcctgc
ggggtaattattacgccgtcggatattacgaattatgtgcctgttacgaccgccaaagat
tctgatttatatgtaactcagttcgataactcggttgccgaaagtgcaggactgctaaaa
atggactttttgggtctgaagacccttacgctgataaaagataccgtaaaactagtaaaa
tacagaacaggaattgatctagatcctgatacttttccgattgatgatgaagaaacgtat
gcacttttccaaagaggtgaaacggttggaatcttccaatacgagtcacccggaatgcag
aaatacatgaaagatctgaagccaacggtttttggagatttaattgcgatgaatgccttg
tatcgtccaggaccaattgaatatattccgtctttcgttcgaagaaaaaacggcgaagaa
gaaatcaaatacgatttagatgcttgcgaagaatacctaggagaaacctacggaattact
gtttaccaagagcaggtaatgcttttgtctcaatctttagctggattttcaaaaggtgat
gccgatgtcttgcgtaaggcaatgggtaaaaagcaaattgaagtactagataaaatgaag
ccaaaattcgttgaacaagctgcggcaaaaggtcacgatgccaaaattttggagaaaatc
tggaaagactgggaagcctttgcaagttacgccttcaacaaatcgcactcgacttgttat
gcttggattgcgtatcaaaccgcatttttaaaagcacattatcctgccgaatatatggcg
gcggtactttcgaataatatgaacgatattaaacaggtttctttctttatggaagaatgt
aaacgtatgggattacaagttcttggaccagacgtaaatgaatcgtattataaatttacg
gtaaacgatgattatgcagttcgttttggaatgggagcgatcaaaggagttggttctgga
gcggttgaaacgattgtagaaaacagaaaagacggaagatataaatcgatttttgatttg
gcgcagcgaattgatttgcgtgcagccaataaaaaagcgattgaaaacttagtacttgct
ggtggtttcgactcttttgaaggaacaaccagagcacaatattttcatgatgatggcgac
ggaattacattttacgaaaaagcaattcggtatggatcaaagtttcaggaaaatgaaaat
tcatcacaagtaagtttgtttggagaagcaagcgaagtgcagattgcagagccaattatt
cctgcatgtgaagattggagtacgatggagaaattggccaaagaaaaagaagttgtcggg
atttatatttctggacatccgcttgatgattttagatttgagatgaagtatttctgcaat
tctcgactagaatcattgaaaagtatgaatgaatatgtgggtaaaaatctaaactttgcc
ggaatcattaataacgtgcagcaccgtgtggcaaaaaacggaaaaggctgggcagttttt
aacttagaaggttatgatgaaagttatgagtttaagatttttggagaagagtatcttaaa
ttccgacatttcctgatacagaataattttgcttttataaaaatactaataaaagatggc
tgggtaaaccatgatactggtaaaaaatcagatccaagaatgcagtttgttgaaatcaga
caattgcaggatattatggaagcctttgctaaaaaactgattgttttactaaatatccaa
gatcttcaaactgaatttattcatagattaagtcatttatttaatgaaaataaaggtgaa
aattcggtgacttttgagattatggaattggaaaaaattaagcgacttgttgaggtagaa
actcctgctgattttgaagagagtgaggatgctgtttttgaaggtgaaaatgaagatgca
gcgcaagaaaccaaaattcaagaagtaaacgaaattgaagaaataaaagttgttaccaaa
ttaacaatgccaagccgaagattaaagattaagatttctaccgagcttcttcaagaatta
gagaaattacaggtaaattttaagctgaactaa
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