Flavobacterium plurextorum: NLG42_08910
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Entry
NLG42_08910 CDS
T08840
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fplu
Flavobacterium plurextorum
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fplu03032
]
NLG42_08910 (topA)
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_08910 (topA)
Enzymes [BR:
fplu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NLG42_08910 (topA)
DNA replication proteins [BR:
fplu03032
]
Prokaryotic type
DNA Topoisomerases
NLG42_08910 (topA)
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NLG42_08910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Poly_export
DUF4294
Motif
Other DBs
NCBI-ProteinID:
UUW10921
LinkDB
All DBs
Position
1981200..1983716
Genome browser
AA seq
838 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGSDFQVESSYGHIADLPSKEIGVDVENGFKPKYEVSPDK
KALVSKLKTLSKNAETVWLASDEDREGEAISWHLAEELKLDKKKTKRIVFHEITKSAILK
AIDNPREIDYNLVNAQQARRVLDRLVGYELSPVLWRKIKGGLSAGRVQSVSVRLIVERER
EIQNFNAVATYSIVAEFVNEAGKAFKAKLPKNFNTKKEAEDFLNKNIGSKYKVADLETKP
TKKSPTAPFTTSTLQQEAARKLYLPVGITMQLAQRLYEAGLITYMRTDSVNLSKEAMDAA
EAEIIKSYGKEFSKPRVFANKNKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAQLERTNVKIEADNHSEIFTASGEVLLFEGFLKVYLEGHDDDEEEQEGMLPALK
VNEKLANNYITATERYSRPPARYTEASLVKKLEELGIGRPSTYAPTISTIINRNYVEKGT
LEGQERNYTQLTLQNSKVGEKVLKENTGSDKGKLVPTDIGTIVTDFLVKNFGNILDYNFT
AKVEQDFDEIAEGNIDWAKMMQDFYNKFHPNVKEVEANAERESGERILGKDADGRQVSVR
LGKFGPMAQIGEADDEDKKFASLMSDQNIGNITLEEALNLFLLPKSLGEYKGEEVEVSNG
RYGPYVRHGSVFISLPRGEDPLGVSKERAQELIDEKALADAPIAVYKGEPVQKGVGRFGP
FIKWNGLFVNVSKKYNFDNLSQADVEELIEDKLQKNIDKVLHNWEDEGILVEKARWGRSV
ITKGKIKIELSKDVDATKLTLAEVQEMIAKKTPVKKAPAKKAATTKKTPAKKPAAKKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtggagtcacctgcaaaggcgaaaacaatcgagaaattt
ctaggaagcgattttcaggtggagtcaagttatggtcacatagccgacttaccatcaaag
gaaataggagtagatgtagagaatggttttaaacctaaatatgaagtttctccagataaa
aaagctttggtaagtaaacttaagacactatctaagaatgccgaaacggtttggttagca
agcgatgaggaccgcgagggtgaggctatttcttggcacttggcggaagaactgaaacta
gataaaaagaaaacgaaacgtattgtttttcatgagattacaaaatctgcgattcttaaa
gcaattgataatccaagagaaattgattataatttagtaaatgcacaacaggcacgtcgt
gttctggatcgtttagtaggttacgaattatcgccagttttatggagaaaaattaaaggc
ggactttctgcaggacgtgtacaatcagtttctgtacgtttgattgttgagagagagcgc
gaaattcagaattttaatgcagttgcaacgtattcaattgttgccgagtttgtgaacgaa
gctggaaaagcttttaaagcaaaactgccaaaaaacttcaatactaaaaaagaagccgaa
gatttcttaaataaaaatatcggttctaaatataaggtagcagatttagaaactaaacct
accaaaaaatctccaacagcaccttttacaacttcaacgttgcagcaagaagcagcgaga
aaattgtatttaccagttggaattacaatgcagttagcacagcgtttatacgaagccgga
cttattacttacatgagaacggactcggtaaatctttctaaagaagcaatggatgccgct
gaagctgaaattataaaatcatatgggaaagagttttcgaaacctagagtttttgcaaac
aagaataaaggagcgcaagaagcgcacgaagcaattcgtccgactgatatgtcacgtcat
actgtaaatattgatcgtgatcaggctcgtttatacgatttgatttggaaaagaactttg
gcttcgcaaatgagtgatgcacagttagaaagaacaaacgtaaaaattgaagcagataat
cacagtgaaatttttaccgcttctggagaagtattgcttttcgaaggtttcttaaaagtg
tatttagaaggtcacgatgacgatgaagaagagcaagaaggaatgcttcctgcattaaaa
gtaaacgaaaaactagcaaataattatattacagctacagagcgatattcaaggccgccg
gcacgttatactgaggcatctttggtgaagaaactagaggaacttggtattggacgtccg
tctacttatgcgccaactatttcgacaattatcaatagaaattatgttgaaaaaggaact
cttgaaggtcaagaacgtaattatacacagcttactttgcaaaacagcaaagtaggagag
aaagttttaaaagaaaatacaggttctgataaaggaaaattggttccaacagatatcgga
actattgtaacagatttcttggttaaaaacttcggaaatattttagattataattttact
gcaaaagttgagcaggattttgatgaaattgctgaaggaaatattgactgggcaaaaatg
atgcaggatttctacaataaatttcatccaaatgtaaaagaagttgaggcaaatgctgaa
cgtgaaagcggtgaaagaattctaggaaaagatgctgatggaagacaagtttctgttcgt
ttagggaaatttggtccaatggctcaaattggagaagctgacgacgaagataaaaagttc
gccagcttaatgtcagatcaaaatattggaaatattacacttgaagaagctttgaatttg
tttttgcttcctaaaagtttaggggagtacaaaggagaagaagtagaggtgagtaatggt
cgttatggcccttatgttcgtcacggaagtgtgtttatttcattgcctcgtggagaagat
cctttgggagtttcgaaagaaagagcgcaagagttaatcgatgaaaaagcacttgctgat
gcgccgattgcggtatataaaggagagcctgttcagaaaggtgtggggcgttttggtcct
ttcattaaatggaatggtctttttgtaaatgtgagcaaaaaatacaattttgataatttg
tctcaggctgatgttgaagaactgatcgaagataaattgcaaaaaaatatagataaagta
cttcacaattgggaagacgaagggattttggttgagaaagcgcgttgggggcgttctgta
attacaaaaggtaaaatcaaaattgaattgagtaaagatgttgatgcaacaaaattaaca
ttggcagaagttcaagaaatgattgctaagaaaactccagtaaaaaaagcgccagcgaaa
aaagcggcaacaactaaaaaaactccagctaaaaaaccagctgctaaaaagaaataa
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