Flavobacterium plurextorum: NLG42_14125
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Entry
NLG42_14125 CDS
T08840
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03420
Nucleotide excision repair
fplu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NLG42_14125
03430 Mismatch repair
NLG42_14125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_14125
Enzymes [BR:
fplu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLG42_14125
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NLG42_14125
MMR (mismatch excision repair)
Other MMR factors
NLG42_14125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_11
DUF4227
AAA_12
ResIII
AdenylateSensor
DEAD
ATPase
Motif
Other DBs
NCBI-ProteinID:
UUW07241
LinkDB
All DBs
Position
complement(3158603..3160417)
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AA seq
604 aa
AA seq
DB search
MFVCEKDSINKEQEDAILEDNSVLLIACPGSGKTRTLTFKIAYELSRLKSDKEFVIAITY
TNRASDEIKERVELLGVDTAQLWIGTIHSFCMEWILKPYHLYSERLKNGFKVINSYDTQE
LLTNLCANYTNPNVSFYDFQYYATIKGTYKFTSKSSNQNNHIKAILQEYFGILKNNNQLD
FEQILFYAYEILKSKPVVAKVLSKLFPFILIDEYQDTKEIQYHIISKILSVNKGNSKTLI
VGDPNQSIYDSLGGYPMPKDELEKLLGFKLTPLSLDKNYRSSSAIISYFDYYKTFETPIV
AFGNGKDYPSTITFNSVVSVNDLIEELAQLILFNVESAGISPNEICITAPQWVHIASITR
KLIIRLPDFSFDGPGMAPFSRDIDNFWFKVSRVALTEPSPFMYIRRLRWSKEILNELDSA
GVDVSNVSSKEFLRICNSFEINETDGLTYLKIFFNQICEKLKIILPNFPSLDEHFNSFFA
SSESRIQRLIDEGNPYIADIENFRKVFRQRDGITVSTIHGTKGEEYDAVIGFGLLDGYVP
HFNDNNGIINSKKLLYVLASRARKNLHLISEKYRNVHRYHAPEGKPPTSHLIEYNYEYSV
MDYG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttgcgaaaaagacagtataaataaagaacaggaagatgcaattcttgaagat
aatagcgtacttcttattgcttgtcctggaagcggaaaaacaagaacccttacattcaaa
attgcttatgagttaagcaggttgaaatctgacaaggaattcgttatagccataacctat
actaacagggcttcagatgagataaaggagcgtgttgagttattaggagttgatacggca
caattatggattggcactatccattctttttgtatggaatggattttaaagccatatcat
ttgtattctgaacgattgaagaacggctttaaggttatcaattcatatgatacacaagaa
ctcttgactaacttgtgtgctaattatacaaatcctaatgtaagtttttatgattttcaa
tattatgctaccataaaaggaacctacaagtttacctcaaaaagtagcaatcaaaataac
catataaaagctattttacaggaatattttgggatattgaaaaacaacaatcaattggat
tttgagcagatacttttttatgcttatgaaatattaaaatcaaaaccagttgtagcaaaa
gttttatccaaattatttcctttcattctaatagatgagtatcaggacactaaagaaata
cagtatcacatcatatctaaaatattaagtgtaaacaaaggcaattcaaaaacacttata
gttggcgacccaaaccaatctatttacgactcgctgggaggctatccaatgcctaaagat
gaattagaaaaattattaggatttaaattgaccccactaagcttagataaaaactatagg
tcatcgtcggctattatcagttattttgattattataaaactttcgaaactccaattgtc
gcatttggtaatggaaaagattacccaagtacaattacattcaattcagttgtatctgta
aatgatttgattgaagaattagctcagttaatattgttcaatgtagaatcagccggaatt
agtccgaacgaaatatgcatcactgctccacaatgggtacatattgcaagcattacaaga
aaacttatcatcagacttcctgatttcagttttgacggaccaggaatggctcctttttct
cgggatattgataatttttggttcaaagtttcacgagttgcattgactgaaccttctcca
tttatgtacataagaaggttaaggtggagtaaagaaatattaaatgaacttgatagtgca
ggagttgatgtttcaaatgtaagtagtaaagaatttttaagaatttgtaattcttttgag
ataaacgagacagacggtttaacttatttaaaaattttctttaatcagatttgtgaaaag
ttaaaaattatacttcccaattttccctcgttagatgaacatttcaattcattttttgca
agttctgaaagtagaattcaaagactgatagatgaaggaaatccatatattgccgatatt
gaaaatttcagaaaagtattcagacaacgagatggaattactgtttccacaatacacgga
actaaaggcgaagaatacgatgcagttattggctttggtttattggacggttatgttcct
cattttaatgataataatggtattatcaattcaaaaaaactcttgtatgttttagcttca
agagcaagaaaaaatttacatcttatttctgaaaaatatagaaatgttcatcggtatcac
gcacctgaagggaaaccaccaacttcccatttaatcgaatataattatgaatactctgta
atggactacggctaa
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