Flavobacterium plurextorum: NLG42_16580
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Entry
NLG42_16580 CDS
T08840
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03420
Nucleotide excision repair
fplu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NLG42_16580
03430 Mismatch repair
NLG42_16580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_16580
Enzymes [BR:
fplu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLG42_16580
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NLG42_16580
MMR (mismatch excision repair)
Other MMR factors
NLG42_16580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UUW07710
LinkDB
All DBs
Position
3741288..3743624
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AA seq
778 aa
AA seq
DB search
MQKYIDQLNEAQRQPVLKKDGPMIIIAGAGSGKTRVLTIRIAYLMAQGIDAFNILSLTFT
NKAAREMKHRISDIVGASEAKNLWMGTFHSIFARILRSESDHLGYPSNFTIYDSQDSARL
ISSIIKEMQLDRDVYKPKQILGRISSYKNSLITVKAYFNNPELVEADAMAKRPRLGDIYQ
QYVERCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVIMFRLEQNYRSTRNIVEAANT
VMEHNKTKLDKVVWTANDFGPKIKVHRSLTDAEEGRFVASTIFEQKMQNQLHNGSFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVINPKDEEALIRVINYP
ARGIGDTTVEKLTIAANHYKRSIWEVMVNIDKIDLKLNAGTKNKLKDFVTMIQSFQVIDQ
NQDAFYITDHVAKKTGLVQELKKDATPEGMAKIQNIEELLNGIKDFTEGQKEIDGARGAL
AEFMEDVALATDLDKDTNDDDRVALMTIHLAKGLEFPHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLTDSEPSRFIEEIDGQFLEYLTPAETNY
RYKSPIDGDIFGDVDKSKLRLAKPVGGTPPKHVTDNNPKPDLNIRKLKPVAGNAPVSSGA
NLFDNKLTVGNVVMHERFGKGEVVNLEGVGADKKAEIKFEVGGIKKLLLRFAKLDVVG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtacattgatcaactcaatgaagcgcaacgacaacccgttctaaaaaaagac
gggccaatgattattattgctggtgcaggttcggggaaaacccgtgttttaacaattaga
attgcttatttgatggctcaaggtattgatgccttcaatattttatcgctgacttttacc
aataaagcggctcgtgaaatgaaacacaggatttcggatattgtgggagcatctgaagca
aaaaacctttggatgggaacttttcactccatttttgctcgtattctgcgttcagaatca
gatcatttagggtatccatcgaattttactatttacgattctcaggattctgctagatta
atttcttcgattattaaagaaatgcagctggatcgtgatgtttataaaccgaaacagatt
ttaggacgtatttcaagttataaaaatagtttaattacggtaaaagcatatttcaacaat
ccagaattagttgaggccgatgcaatggcaaaaagacctagattaggagatatttatcag
caatatgtagagcgttgttttaaagcaggtgcaatggattttgatgatttgttattgaaa
accaacgagttattaactcgttttcctgaggttttggctaaatatcaaaaccgttttcgt
tatattttggttgatgagtaccaagatacgaatcactctcagtatttgattgtaagagct
ttatcagataaattccagaatatttgtgtggttggagatgatgctcaaagtatctatgca
ttccgtggagcaaatattaataacattctgaatttccagaaggattacgagggtgttata
atgttccgtttagagcaaaattaccgatcaacccgtaatattgttgaagccgcaaatacg
gtaatggagcataacaaaaccaaacttgataaagtagtttggacagcaaatgattttgga
cctaaaattaaagttcaccgaagtttgactgatgctgaagaaggtcgttttgtagcaagt
actatctttgaacaaaaaatgcagaatcagcttcataatggctcttttgcgattttgtac
cgtaccaatgcgcagtctcgtgcaatggaagatgcgttaagaaaacgtgatattccgtat
agaatttacggaggattatcgttctatcaacgtaaagaaataaaggatgttttgtgttat
ttgcgtttagtaattaatccaaaagatgaagaagcgttgattcgtgttatcaattatcct
gctcgtggaattggagatacaactgtagaaaaacttactattgctgccaatcattacaaa
cgatcgatttgggaagtaatggttaatattgataaaattgacttaaagctgaatgctgga
acgaagaataaactgaaggattttgtaacaatgattcagagttttcaggttattgatcaa
aatcaggatgctttttatataacggaccatgttgcgaaaaaaacgggtctggttcaagaa
ttgaaaaaagatgcgactcctgaaggaatggcaaaaattcagaatattgaagaactttta
aacggtattaaagattttactgaaggacaaaaagaaattgatggtgcaagaggtgctttg
gctgaatttatggaagatgtagctctggcaacagatttggataaagatactaatgatgat
gatcgtgtagcattgatgacgattcacttagcaaaaggacttgagtttcctcatgttttt
gtagttggtatggaggaagatttgtttccgagtgcgatgagtatgagtactagaagtgaa
ttggaagaagaacgtcgattattttacgtagctttaacacgtgcagaacaccaagcttat
ttaacgtatgcacaatctcgttatcgctgggggaaattgactgatagtgaaccttcacgt
tttattgaagaaatcgatggacagtttctagaatatttgactcctgcggagactaattat
cgttataaatcgcctattgacggagacatttttggagatgttgataaatcgaaattgaga
ttagcaaaaccagtaggaggaacgcctccaaaacatgtaacggataataatccgaagcca
gatttaaatattcgaaagttaaaacctgttgcaggaaatgcgcctgtaagttcaggtgct
aatttgtttgataataagttaacggttggaaatgttgtaatgcacgaacgttttggaaaa
ggcgaagtggttaatcttgaaggtgttggagctgataaaaaagcagagatcaaatttgaa
gtaggaggtattaaaaagcttttgctgagatttgctaaattagatgtggtgggataa
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