Flavobacterium plurextorum: NLG42_16605
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Entry
NLG42_16605 CDS
T08840
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03030
DNA replication
fplu03430
Mismatch repair
fplu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLG42_16605 (holA)
03430 Mismatch repair
NLG42_16605 (holA)
03440 Homologous recombination
NLG42_16605 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fplu03032
]
NLG42_16605 (holA)
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_16605 (holA)
Enzymes [BR:
fplu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLG42_16605 (holA)
DNA replication proteins [BR:
fplu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLG42_16605 (holA)
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLG42_16605 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
UPF0113
UDI
Motif
Other DBs
NCBI-ProteinID:
UUW07715
LinkDB
All DBs
Position
3747026..3748030
Genome browser
AA seq
334 aa
AA seq
DB search
MDEVIKIVNDIKAGNIKPIYFLMGEEPYYIDKLSEYIEQNVLAEEERGFNQTVLYGRDVS
VEDIVSTAKRYPMMADRQVVIVKEAQDLSRTIDKIESYVNNPMETTVLVFCYKYKTLDKR
KKVTKLLAQNGIVFESKKLYENQVGDWIKRILAGKKYTIDPKANAMLVEFLGTDLSKINN
ELEKLQIILPQGTMITPQHIEENIGFSKDYNVFELRKAIGERNQLKAYKIAENFAHNPKE
YPLVMTTGLVFGFFIQLLKYHGLKDKNPKNVAAAIGVNPYFLKEYDLAVKNYPMRKVSQI
VGALRDIDVKSKGVGANALPQSDLLKEMLYKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagttataaaaattgttaatgatataaaggcagggaatataaagcctatttac
tttttaatgggtgaagaaccttattatatagataagttgtctgaatatatagaacaaaat
gtactggctgaagaagagagaggttttaatcaaactgttttatacggaagagatgtttct
gtagaagatattgtttcaacggccaagcgctatcctatgatggctgatcgtcaggttgtt
attgtgaaagaagcgcaggatttatcaagaacaatagataaaatagagtcgtacgttaat
aatccgatggaaactacggttttggttttttgctataaatacaaaactcttgataagcga
aaaaaagtgactaaacttttagctcaaaacggaattgttttcgaaagtaaaaaattatac
gaaaatcaagttggagattggataaaacgtatccttgcaggaaaaaaatacacaattgat
ccaaaagcaaatgcaatgctggttgagtttttaggaactgatttgagtaaaatcaataat
gagttagagaaattacaaatcattttacctcaaggaacaatgattacgcctcaacatatt
gaggaaaatattggttttagtaaagattataatgtttttgaacttcgtaaagctattgga
gaacgcaatcagttaaaagcctataaaattgctgaaaattttgcgcataacccaaaagaa
tatccattagttatgactacgggattagtgtttggtttttttattcagcttttaaaatac
cacggacttaaagataagaatcctaaaaatgttgctgccgcaattggtgtaaatccttat
tttttaaaggaatatgatttagctgtgaaaaattatccaatgcgaaaagtaagtcaaatc
gttggtgcattacgtgatattgatgttaaaagtaaaggagttggagcgaatgctttacca
cagtcggatttgttaaaagaaatgctgtataaaatatttaattaa
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