Flavobacterium plurextorum: NLG42_19505
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Entry
NLG42_19505 CDS
T08840
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03420
Nucleotide excision repair
fplu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NLG42_19505
03430 Mismatch repair
NLG42_19505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_19505
Enzymes [BR:
fplu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NLG42_19505
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NLG42_19505
MMR (mismatch excision repair)
Other MMR factors
NLG42_19505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
UUW08281
LinkDB
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Position
4476787..4479114
Genome browser
AA seq
775 aa
AA seq
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MTDPILENLNPKQLQAVKTTEGYVRVIAGAGSGKTKALTSRFAYIVDRLGINSSNILCVT
FTNKAAQEMKKRVKALIGDLYDVSFITTYHGFCVRFLREEINKIHYPKNFIILDAEDQKT
ILRDVFAEMEINSKNLTFKQVLRFISKQKSTSDYLSYMIENNSFTADEKDTLSSQVYQKY
LDKQKRNYALDFDDLIHFTAFILDSNPDVLSKWQEMMHYIQVDEAQDSSDSQFHLVEMLS
RVHQNLFLVGDPDQTIYEWRGAKPEYLVEFDRMFPDAETIIMNQNYRSTPNILKVGNHII
KNNKVRVDKDMVTDNPEGVEVVHFHGKNDFEETLWVASEIKEILKTEKASYSDITILYRS
NHLSRNIEQALIKENIPYAIFGGVRFFERKEIKDVLSFLRLIVQGDNFSFLRMFNHPSRG
LGKKFLERLSFLAAEQNLSLLEALHRNIEDKELNKKAAADFLALVSELKKEADQNSISDL
VKIILDKSGLSELYRKDGDEDRLENIKELVTSMMLLEKENNSPVNIVEYLQEIALYTDLD
KDTENQDKVRLMTIHISKGLEFPYVFLCGFTEGVLPSALSIKERRKRAIEEERRLMYVAV
TRAEKRFYMTDSEGFNFTTGLNKYPSRFLFEIKEEFYVRKVKLSAAILQASQSSSAAAKN
SEDMAFKQGDYVMHPVWNRGRIESVDLEKNQYIVHFFEMEKEKPIDFAFRFLTAASDSQE
DSASPADLLDLHENLKNMPDPFKDNDSSNGVFEKDRNSSDIFDAGADSSEKKWPE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccgatattagaaaatttaaatcccaaacagcttcaggcagtgaaaacgact
gaaggctatgtacgtgttattgcaggtgccgggtcaggaaaaacgaaagcactgacttcg
cgttttgcctacatcgttgacaggctgggaatcaactcatccaatatcctctgtgtaacc
tttaccaacaaggcggcgcaggaaatgaaaaagagagtcaaggcactgatcggcgacctt
tatgatgtcagcttcataaccacctaccacggcttctgcgttaggtttctacgggaagaa
atcaacaaaatacactatccgaagaattttatcatactggatgccgaagaccagaaaacg
atccttcgggatgtattcgctgaaatggagatcaattccaaaaacctaacgttcaagcag
gtcttaagatttatctccaaacagaaaagcacctcggattacctgagttacatgattgaa
aataacagcttcactgctgatgaaaaagacacgctgtccagccaagtttaccagaaatac
cttgataagcagaagcgtaattatgcattggattttgatgacctgatccattttacggcc
tttatcttagacagtaacccggatgtgctttccaaatggcaggaaatgatgcattatata
caagtggatgaggcccaggacagttccgacagccagtttcatctggtggaaatgctttcg
cgtgttcaccaaaacttatttcttgttggtgatcccgatcagacaatctatgaatggagg
ggtgctaaacccgaataccttgtggaatttgacaggatgtttcctgatgcagagaccata
ataatgaaccagaattaccgctccacgccgaacatcctcaaagttggcaaccatatcatc
aaaaacaacaaggtaagggtagataaggatatggtcactgacaatcccgaaggagtggaa
gtggttcattttcacggcaaaaatgattttgaggaaacactctgggtggcatcggaaatc
aaagaaattcttaaaacagaaaaagcttcctattccgatataaccattttataccgttcc
aaccatctttccagaaacattgagcaggcacttataaaggaaaacattccatatgccata
tttggcggtgtgcgttttttcgaacgaaaggaaatcaaagatgtgctttcctttttaagg
cttattgtccaaggggataatttctcattcctgcgcatgttcaaccatccctcccgcggg
cttggcaaaaaatttcttgaaaggctcagctttctcgctgcggagcagaacctctccctt
cttgaggcgctacatcgtaatattgaagataaagaactcaataagaaagcggctgcagat
tttctggcactggtttcagaacttaaaaaagaggcagatcagaattccatctcggatctg
gttaaaatcatactcgataaaagcgggctctctgaactctaccgcaaggatggagacgaa
gacaggcttgaaaatataaaagagctcgtaacttctatgatgctattggagaaagaaaat
aacagccctgtcaatattgtagagtaccttcaggaaatagcactgtataccgatcttgat
aaagataccgaaaaccaggataaggttcgtctgatgaccatccatatctctaaaggtctt
gaatttccatatgtattcctttgcggttttaccgaaggggtgctgccaagcgcgctatcg
attaaagaaaggagaaaacgtgcaattgaggaggaaagaagactgatgtacgtggcggtt
accagagccgaaaagaggttttatatgaccgactcggaagggtttaattttaccaccggc
ctcaataaatatccttcaaggtttttatttgaaattaaagaagaattttatgtgaggaag
gtaaaactttccgctgcaattctgcaggcctcacaatcctctagcgcagctgccaaaaac
agcgaagatatggcatttaagcagggtgattatgtaatgcatccagtatggaatagagga
aggatagaatccgttgatctggagaaaaaccagtacatcgttcacttctttgaaatggaa
aaggaaaaaccaattgattttgcttttcgctttcttacagccgcgtcagattcccaagag
gattccgcatcgcccgccgatttgcttgatctgcacgaaaacttgaaaaatatgcccgat
ccctttaaagataatgattcttctaatggcgtttttgaaaaggaccgcaattcttcagac
atatttgacgcaggtgctgatagcagtgaaaaaaaatggccggaataa
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