Flavobacterium plurextorum: NLG42_19560
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Entry
NLG42_19560 CDS
T08840
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fplu
Flavobacterium plurextorum
Pathway
fplu03030
DNA replication
fplu03430
Mismatch repair
fplu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NLG42_19560 (dnaE)
03430 Mismatch repair
NLG42_19560 (dnaE)
03440 Homologous recombination
NLG42_19560 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fplu03032
]
NLG42_19560 (dnaE)
03400 DNA repair and recombination proteins [BR:
fplu03400
]
NLG42_19560 (dnaE)
Enzymes [BR:
fplu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NLG42_19560 (dnaE)
DNA replication proteins [BR:
fplu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NLG42_19560 (dnaE)
DNA repair and recombination proteins [BR:
fplu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NLG42_19560 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
UUW08292
LinkDB
All DBs
Position
4486704..4489757
Genome browser
AA seq
1017 aa
AA seq
DB search
MFLNCHSFHSLRYGTIPLDDLIRQAAECGVTAAALTDINTVTGIYDFIKGCEASGIKPLI
GIEFRCRHKFRYIGLAKNAAGLAQMNRFLTDYNFSGAPLPEKAPSFESVYFIYTLENAPA
QLGENEFIGIEPDQLGRLFMPELKKKISKMVILRPVVFRTKREYNLHRILRAVDLNELLS
KLGPDDCCRKSNMMIPEAELIGLYKDYPQIIQNTRLIIENCNFKYDFESPKNKRHYTKNK
KGDIALLTTLAEEGLVWRYGRHNAEAKARVEKELKVINDLEFSGYFLITWDIIRYSNSRG
FLHIGRGSGANSIIAYCLGITDICPLELDLYFERFLNENRKSPPDFDIDWSWKERDVILK
YIFDRYGYENVAFCGTNVEFKYRSIFREVGKVFGLPKDELDMLAKNPMKLHQTNSIVKLV
QEYGMMLEKYPNMRSMHSCGILISEEPLTNYTPLEMPPKGFPIVLFDMHTAEDIGFDKFD
ILSQRGIGHIDDTVKIIEQNRGIRINIRDTRISKNEQSANVYLAEGRTIGCFYIESPAMR
GLLRRLKCNNYKTLVAASSIIRPGVAQSGMMKEYIFRHNNPSRFEYFHPVFEKELGETYG
IMVYQEDVIKIALHYGGLSAADGDILRRAMSGKGRSKAALQRVKDDFFIAAAAKGHPEAL
SQEIYRQIESFAGYSFCKAHSASYAVESYQSLYLKVHYPVEFMVAVINNQGGFYRTEIYV
HEARMAGAVIHTPCVNKSGYETVLYGSHIYLGFMHLQGLDSKLSQFIAYERERNGVYKSL
EDFINRVPMGIENIKVLIFIGAFRFTGKTKNQLLVQVSLLMNNFKPENRGLMLIEQPAKE
FKLPVLERSVFEDAFDEIELLNFPVSCTVFDLLKTRFRGDIMVRDLLKYHKKQVRMLAYL
ISTKQVPTKRGNMYFGTWIDHEGAYFDTAHFPDSLVNNPFQGGGCYLLLGTVEIDYHFPT
ITISRMAKMPFIPDPRYSDSEKRYTTQHNIKQDVSSTHRQPYPQDHEINLPRHRMKF
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaactgccactcttttcattccctgcgctacggcaccattccgctggatgat
ctgatcagacaggcagccgagtgcggtgtcactgctgctgctttgaccgacatcaatacc
gtaacagggatttatgattttataaaaggctgtgaagcctcaggcataaaaccattaatt
ggaatagaattccgctgcagacacaaattccgctatatagggcttgccaaaaatgctgca
gggcttgcccagatgaaccgctttctgaccgattataatttcagcggtgctcccctgccg
gaaaaagctccgtcttttgaatcggtgtattttatctatacgctggaaaatgcgcctgca
cagctcggcgagaatgaatttatcggcattgagcctgaccagctcggcaggctttttatg
cccgaacttaaaaagaagatttccaagatggttatcctgcgacctgtggtattccgaacc
aaaagggaatacaacctgcacaggatactgcgcgccgttgacctcaatgagcttctatcc
aaacttgggcctgatgactgctgcagaaaatctaatatgatgattcccgaagcggaactt
atcgggctgtataaagactatccacagatcatccaaaatacccgattaataattgagaac
tgtaattttaagtacgatttcgaaagcccgaaaaacaaaaggcattacactaaaaataaa
aaaggggacattgcccttctgaccacccttgccgaggaaggtctggtatggcgttacgga
aggcataacgctgaagcaaaagcgcgtgtggagaaagagcttaaagtgatcaatgatctt
gaattcagtggctattttctcattacttgggatatcatacgctacagcaacagccgcggt
tttctgcatatcggaagaggttcgggcgctaacagcattattgcctactgtctgggaata
acggacatctgccctttggagcttgacctgtattttgagcgctttctgaatgaaaaccgc
aaaagccctcctgattttgatatcgactggtcttggaaagagcgtgatgtgatcctgaaa
tacatcttcgaccgctacggttatgaaaatgtggcgttttgcggcactaatgtggaattc
aaataccgctcgatttttcgcgaggtcggcaaagttttcggacttccgaaagacgagctg
gatatgctggcaaaaaatcccatgaagctccaccagaccaattccattgtcaaattggtg
caggaatacggcatgatgctggagaaatatcccaatatgcggagcatgcattcctgcgga
atcctgatctcggaagaaccgcttaccaattacacgccgctggaaatgcctccaaaaggt
tttcccatcgtgctctttgatatgcatacggctgaagatatcggttttgataaatttgat
atattgagccagagaggcatcggacatattgatgacacggtaaaaataattgagcagaac
agaggcatccgcatcaatatccgggacacgagaatctcaaaaaacgaacagtccgcaaac
gtctatcttgcagaagggcgaaccataggatgcttttacattgaaagccctgctatgcgt
gggcttttgcgacgtctgaaatgcaataactataaaacacttgtggctgcctcttccatt
atacgtcctggagtggcacagtcagggatgatgaaagagtatatcttccgacataacaac
ccgtcaagatttgaatattttcatccggtctttgaaaaggaactaggagaaacttacggc
attatggtgtatcaggaagacgtgataaaaattgccctgcattatggcgggctctcagcc
gccgatggagatatcttaaggcgtgccatgtcgggcaagggacgctcaaaagccgctttg
cagagagtaaaggacgatttctttattgcggccgcggcaaaagggcatcccgaagcgctg
agccaggaaatctaccgacagatcgaatcctttgcaggctattccttctgcaaggcgcac
tccgcatcctatgcggtggaaagctaccagagcctttatctgaaggtgcactaccctgtt
gaatttatggtagccgtaatcaataatcagggaggattttaccgcacggaaatctacgtg
cacgaagccagaatggcgggagctgttatccataccccatgcgtgaataaaagcggatat
gaaactgtgctttacggcagccatatctatctgggctttatgcacctgcaggggctggat
tccaaactctcgcagttcatcgcttatgagcgcgagagaaacggagtttataaatcactc
gaagatttcataaacagggttcccatgggtattgagaatataaaggtacttattttcatt
ggcgcattccgctttacgggaaaaaccaaaaatcagctgctggtacaggtaagccttctg
atgaataatttcaagcccgagaaccgcgggcttatgctcattgaacagccagcaaaagaa
tttaagctgcctgttctggagcgctctgtatttgaagatgcttttgatgaaatcgagctt
ctgaattttccggtttcctgcaccgtttttgatctgctcaagaccagattccgaggggat
atcatggtgcgcgatcttctgaaatatcataaaaagcaggtccgcatgctggcttacctc
atctcgaccaagcaggtgcctaccaaaaggggcaatatgtatttcgggacgtggatcgat
catgagggagcctattttgatacggcgcattttccagacagtctggtaaataacccgttt
cagggaggaggctgctacctgcttttggggactgtggaaattgattatcattttccgacg
atcaccatttccagaatggcgaaaatgcctttcattcctgatccgagatattctgactcg
gaaaaaaggtataccacacagcacaatatcaaacaggatgtcagcagcacacaccgccag
ccttatccgcaggatcatgaaattaatctgccgcgtcacagaatgaaattttga
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integrated database retrieval system
