Flavobacterium plurextorum: NLG42_23825
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Entry
NLG42_23825 CDS
T08840
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fplu
Flavobacterium plurextorum
Brite
KEGG Orthology (KO) [BR:
fplu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fplu03009
]
NLG42_23825 (rimO)
Enzymes [BR:
fplu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NLG42_23825 (rimO)
Ribosome biogenesis [BR:
fplu03009
]
Prokaryotic type
ribosomal protein modification factors
NLG42_23825 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
UUW09113
LinkDB
All DBs
Position
5504970..5506280
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AA seq
436 aa
AA seq
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MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRANGKEVTHEATKDEGNIIVINTCGFID
NAKAESVNMILEYADKKDKGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPQLLK
ALGADYKHELLGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHISQPIEKLVKEAQ
GLAKNGVKELILIAQDLTYYGLDLYKKRNLAELLEELAKVEGIEWIRLHYAYPTGFPMDV
LELMKREPKICNYIDIPLQHISDSILKSMRRGTTQAKTTQLLKDFRAAVPGMAIRTTLIV
GYPGETQEDFEILKGFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDDVKQARANEIMEL
QSQISWDLNQEKVGQVYKCIIDRKEGAHFVGRTEFDSPDVDNEVLIDASKHYVKTGEFVN
IRIIEATEFDLYGEPA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaagtctttaaaaaagaacaaaattaacgtaatcactcttgggtgttcaaaa
aatgtatatgatagtgaagtgcttatgggacaacttcgtgcaaacggtaaagaagttact
catgaagccactaaggatgaaggaaacattattgtaattaacacttgcgggtttattgat
aatgcaaaagcagaatcagttaatatgattttggaatatgctgataaaaaagacaaagga
ttagttgataaagtttttgtaactggatgtttatcggaacgttacagaccagatttagaa
aaagaaatcccgaatgtagatcaatattttggcacaactgaattacctcagctgttaaaa
gctttaggagccgattataaacatgaattattaggggaaagattaacaacaactcctaaa
aattatgcatatttaaaaattgccgaaggctgcgacagaccttgcagtttttgtgctatt
ccgctgatgcgtggatcacatatttcacaaccaattgaaaaattagttaaagaagcacaa
ggtttagcaaaaaatggcgttaaagaattaatactaatcgctcaagacttaacatattac
ggtttagacctttacaaaaagagaaatcttgccgaattattagaagaattggcaaaagtt
gaaggcattgaatggattcgtttgcattatgcttatcctactggtttcccgatggatgtt
ttggaattaatgaaacgcgaacctaaaatttgtaattatattgatattccattacagcat
atttcagattctattttaaaatcaatgcgtcgtggtacaacacaagctaaaacaactcaa
ttattaaaagatttcagagctgctgttccaggaatggcaattagaacaactttaatcgtt
ggatatccaggtgaaactcaggaagattttgaaattttgaaaggttttgttcaggaaatg
aaatttgacagaatgggatgttttgcttattctcatgaagaaaacacgcatgcatattta
ttagaagatgatgttccagacgacgtgaaacaagcaagagctaatgaaattatggaatta
cagtctcaaatttcatgggatttaaatcaagaaaaagtaggacaagtttataaatgtatt
atcgacagaaaagaaggtgcacattttgtaggaagaacggaatttgacagccctgatgtt
gacaatgaagttttaatagatgcatctaaacattatgtaaaaacaggagaatttgttaat
atacgcataattgaagctacagaatttgatttatacggagaacctgcttaa
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