Francisella philomiragia O#319-036: LA56_1162
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Entry
LA56_1162 CDS
T03618
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03420
Nucleotide excision repair
fpm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA56_1162
03430 Mismatch repair
LA56_1162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_1162
Enzymes [BR:
fpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA56_1162
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA56_1162
MMR (mismatch excision repair)
Other MMR factors
LA56_1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
CarD_TRCF_RID
DUF4252
Motif
Other DBs
NCBI-ProteinID:
AJI54665
LinkDB
All DBs
Position
complement(1189935..1192163)
Genome browser
AA seq
742 aa
AA seq
DB search
MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV
TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA
QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQYDINYTHIYTAYEERLLL
DNALDFADLLLYLYELFSLNQQLREYYQSLFKYILIDEFQDTNQVQYMWLKLLVTDNNYM
MAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNR
MSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDVGVDYSDIAILYRSNYLSRVL
EESCIYASIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGNKTL
DTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLET
VINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLE
AGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSLINAEEAYTSSESKKIQ
EKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTVG
SQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKEFYT
VDFGVDVGQKILLADIANLVKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagactttctttcagggttaaatccccaacaaaaaaaagcgaccttgcta
gaggatcgtaattctttgatacttgctggagccggtagtggcaaaacaaaagttttaact
tctcgtatagcatatctctgtcgtgataaaggagtatctgttgaaaatattctagctgta
acatttacaaacaaagccgctaaagaaatccagcatcgagttgagaaaatgcttggtatt
tcaacttttggtatgtggataggtacttttcacggtattgctcatagattattacgtaag
catgctcatgagttgggcctagataagaactttaggattcttgatcaagatgagcaagct
caattaatcaaaaaagtaattaagagtttggatcttgatgataaaaaatatccaccaaaa
ttattgcaaaactttattaataaacaaaaagataaggctgttcgtagtaacaaattaaca
aagcagtatgatattaattatactcatatttatactgcttatgaagagaggttgctgtta
gataatgctttagattttgccgacttacttttgtatttatatgaattattttctcttaac
caacagcttagagaatactatcagagtttattcaagtatattttgatagacgagtttcag
gatactaaccaagtccaatatatgtggttgaagttacttgttacagataataactacatg
atggctgttggtgatgatgatcagtcaatatatggttggcgcggagccgttgttgataat
attcacaaatatgtcgcagatctaaatgatgttgaaatcataaagttagagcaaaattat
cgttcaacgaagaatattcttaaagtagccaattctgtaatcaaaaataatgataataga
atgtcaaaagaactatggtctgctgctgaagatggcgaaaaagttgaagtatattgtgca
gttaatgagcgggatgaagcgaagtatattatagataaaattcgccagttacatgatgtt
ggagtcgattactctgatatagcaattttatatcgctcaaactacttgtcgcgtgtcctt
gaggagagttgtatttatgcaagtataccttatagaatttatggaggttttcgtttcttt
gatcgagctgaagttaaggatgccttagcatatttaagattagctgttacaagtaatgac
aacttagcatttgagagaattattaatactccaacacgaggaattggcaataaaacttta
gatacaattcgtaatttctcacagattaataatgtgtcatattggcaagccactatagat
attatccagaaagaaattgtaacaaaaagaaccgcatctcttctgttaaagtttatagaa
attataaatgctatttcatcacaaataaaagacttaagtctagataagcttcttgaaact
gtaatcaatgaaagtggtttgttggcatcatatcaagaaaaagatactgaaaaagatcgt
caaaaaattgataacttaaaagagttaataagtgcagctaaagattttgaaccgcagata
gagttacttgatgataatactgatatactacaagattttttgtcttttgcagtgctagaa
gctggtgagatgcaggctgatgaaaatacagatagtgttcagctaatgacaatacatgcg
tcaaaaggtttagaatttcgctatgttttcttagtagcagcagaagaaggagtatttcct
cctagctcgcttattaatgctgaagaggcatatactagttcagaatctaaaaaaatccaa
gaaaagctagctgaagagagacgtttattttatgttgctgttacaagagctatgaaggct
ctaaccattagctatgctcaagtgcgtaatatctttggtagaagtagtttccaagtcaaa
tcacgctttctgatggaaatagactctgaacatattaatgagggtaaactaactgtagga
tctcaaaataaaccaaagttaaagcaaaaatcaaattttggtgtatctccttttgacttt
cttaagtcaaatgatacaaaaggtaataagttcaaaaagggagataaggtgttccataaa
gtctttggtaaggggatttttgtcaaagcacaatctcaaggttcaaaagagttttatact
gtagactttggtgtagatgtcggtcagaagattttattggcagatattgctaatcttgtt
aaggtctaa
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