KEGG   Francisella philomiragia O#319-036: LA56_130
Entry
LA56_130          CDS       T03618                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
fpm  Francisella philomiragia O#319-036
Brite
KEGG Orthology (KO) [BR:fpm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fpm02048]
    LA56_130 (hsdR)
Enzymes [BR:fpm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LA56_130 (hsdR)
Prokaryotic defense system [BR:fpm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LA56_130 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII
Other DBs
NCBI-ProteinID: AJI55867
LinkDB
Position
141641..144781
AA seq 1046 aa
MSKFTEEKLELAFIELLEEQGISYQFGKEIIRDDKDVLLKDDLREYLATRYADDNITASE
ITTIIRKLEAYPASDLYDTNKAIMELVTSGFDFKREDPKAKDIRIHFIDYQNIDANNFKI
VNQLEITGYEKRIPDGIVYINGLPLVVFEFKSAIREEATIKDAFDQLTVRYRRDIPELFK
YNAFCVISDGINNKAGSLFAPYEFFYSWRRITGDEVDVDGIASMHSMIQGMFNRERLVDI
IHNFIYIPDKSHKEEKIVCRYPQYYATKKLYENIIQHQKPHGDGKGGTYFGATGCGKSFT
MLFLTRMLMKSIYFSSPTIVIITDRTDLDDQLGKQFANAKKFIGDNTVVSVESRADLRAK
LKARESGGVFLTTIHKFTEDLDILSERTNIICISDEAHRSQINLDQKIKFTKDGIKKSYG
FAKYLHDSLPNATFVGFTGTPIDATLDVFGNVVDSYTMTESVRDEITVRIVYEGRAAKVL
LDSSKLQEIEKYYQECAEAGANEHQVEESKKAMTNMSVILGDIDRIRAIAKDFVEHYEQR
VSEGATIKGKAMFVSSSRQIAYALFKEIIALRPEWNIKQACEDTAELTDKEKKEILPLER
IKIIMTRNQDDCEELYNLLGTKEYRKTLDTQFKNEKSNFKIAIVVDMWLTGFDVPFLDTI
YIDKPIQQHNLIQTISRVNRKYAGKNKGLVVDYIGMKTAMNKALKQFSSIDSQNFEDIEA
SIVVVKDQLDLLAKLFHTFDKSKYFTGSPVEQLNCLNFASEYIQLTKELENRFMYIVKRL
KAAYDICCGADAFSDHEKDLIHFYLAVRSIVVKLTKGEAPDTATMNKRVANMIEEAIKSE
GVEEIFKLGSDDESKIDIFDEDYLNKIDKVKLPNTKIKLLQQLLAKALEDFKKVNKVKAL
DFSKKLNSLVEKYNERKEQDVLVSDVLNDFTDEIVDLYHALKKERESFGDLGIDFEEKAF
YDILKDIAIRYEFDYPEDKLIALAKEVKKVVDDKSKYTDWNIRDDIKAELKVDLIMLLAK
HGYPPITKDEVFKEIFEQAENFKKNR
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgtcaaaattcacagaagaaaaactagagcttgcttttattgagctacttgaagagcag
ggtattagctaccagtttggcaaagaaattatccgtgatgataaagatgtacttctcaaa
gatgatttgcgtgagtatttagctactagatatgcagatgataatatcacagctagcgag
attacaactattatccgtaagctagaggcttatccagctagtgatctatacgataccaac
aaggctattatggaactagtaactagtggttttgatttcaaacgagaagatccaaaagct
aaagatattcgtattcattttatagattatcaaaatattgatgctaataacttcaagata
gttaatcagctagagataacaggctatgagaaacgcataccagatggcatagtctatata
aatggtttgccactagtagtctttgagttcaaaagtgctatccgtgaagaagcaactatc
aaagatgctttcgatcagctaacagtccgctatagaagagatataccagaactttttaaa
tataatgctttttgtgtcattagtgatggtatcaataacaaggctggttctctatttgca
ccctatgaatttttttactcttggcgaagaatcacaggcgatgaagtcgatgtggatggt
attgcctcaatgcactcaatgatacaggggatgtttaatcgtgagagattagtcgacatt
atccataattttatctatatacctgataaatcccacaaagaagagaaaatagtttgtcgc
tatccgcagtattatgctaccaaaaagctttatgaaaatattatccaacatcaaaaacct
catggcgatggtaagggtggtacatactttggtgcaactggttgcggtaaaagttttaca
atgcttttcttaactcgtatgctgatgaaaagtatttatttctcaagtccaactattgtg
attattacagataggacagatttggatgaccaacttggtaagcagtttgcaaatgctaag
aagtttattggagataatacagttgtcagtgttgagagtagggcagacctaagagctaag
ctaaaagctcgtgaaagtggaggtgtgtttctaactactattcataagttcaccgaagat
ttggatattcttagtgagagaactaatattatctgtatatctgatgaggcacatagaagc
cagataaacctagaccaaaaaattaaattcacaaaagacggtatcaaaaaatcctatggt
tttgctaagtatttgcatgactcattaccaaatgctacttttgtaggttttacaggcacg
ccgatagatgcaactttggatgtctttggtaatgtcgttgatagctatactatgacagag
tcagttagggatgagattacggttcgtatagtttacgagggtagagctgcaaaagtatta
ttagatagctcaaaacttcaagagattgagaaatattatcaagaatgtgccgaagctgga
gcaaatgaacaccaagtagaagaaagcaaaaaggctatgacaaacatgagtgtcatactt
ggtgatattgatagaattagggcaattgcaaaagattttgtagagcattatgagcagaga
gtttctgagggtgctactatcaagggcaaggctatgtttgtctctagtagtaggcaaatt
gcttatgccttatttaaagaaatcattgctttgcgtccagagtggaatattaaacaagct
tgtgaagataccgcagagcttacagataaagaaaagaaagagatacttccattagagaga
attaaaataattatgactcgtaatcaagacgattgtgaagagttatataatctcttaggt
acaaaagagtatcgcaaaactctagatactcaattcaaaaatgaaaaatctaacttcaaa
atagctatagtagttgatatgtggctcacaggatttgatgtgccatttttagatactatc
tatattgataagccaatccaacagcataaccttatccaaactatttcgcgtgttaataga
aaatacgcaggtaaaaataagggcttagtagttgattatattggtatgaaaaccgcgatg
aataaagctcttaaacaattctctagtattgatagccaaaactttgaggatatagaagca
tctatagttgttgtcaaagatcagctagatttattagcaaagctttttcatacatttgat
aagagtaaatatttcacgggttcaccagttgagcaactaaattgtctaaattttgcgagt
gaatatatccaacttacaaaagagctagaaaatagatttatgtatatcgttaagaggcta
aaagcagcttatgatatttgttgtggagctgatgctttttcagatcatgagaaagatctt
atacatttctatctagctgtgcgttctatagttgtcaaactaaccaaaggcgaagctcca
gatactgcaacgatgaacaaaagggtagccaatatgatagaagaggctatcaaaagtgaa
ggtgttgaggagatatttaaacttggtagtgatgatgaatcaaagattgatatttttgat
gaagattatctcaacaaaatagataaagtaaaacttccaaatactaagattaagctacta
caacagctattagcaaaagctctagaagactttaaaaaggtaaataaagtcaaagcatta
gatttttctaaaaagcttaattcacttgtagaaaagtataatgagcgtaaagagcaagat
gtcctagttagtgatgttttaaatgattttacagatgaaattgtcgacttatatcacgct
cttaaaaaagaaagggaatcttttggtgatctaggtatcgactttgaagaaaaagctttt
tatgacatattaaaagatatagctattcgatatgaatttgactatccagaagataagctt
atagctctagctaaagaggtcaaaaaagtagtcgatgataaatcaaaatatactgactgg
aatatcagagatgatatcaaagccgaactaaaagtagatttgataatgctcttggcaaaa
catggctatccaccaattacaaaagatgaagttttcaaagagatatttgaacaagctgag
aattttaagaagaatagataa

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