Francisella philomiragia O#319-036: LA56_1476
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Entry
LA56_1476 CDS
T03618
Name
(GenBank) RNB domain protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fpm
Francisella philomiragia O#319-036
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpm03016
]
LA56_1476
Enzymes [BR:
fpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LA56_1476
Transfer RNA biogenesis [BR:
fpm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LA56_1476
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
FAD_syn
Motif
Other DBs
NCBI-ProteinID:
AJI55562
LinkDB
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Position
1529001..1530875
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AA seq
624 aa
AA seq
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MLLENQSIKNALVIFKSKPAKVVEILDKKIEIETLDSKNIKLPAKNVQILTVVENDFDLD
KLEKLEIPELELTWELLQEQQQTSIDELSELLFESVGANQAYTVWLLVSDGEYFSFNDDF
TINIHSQEQKNQIVSDKQEKLRKEQELNDFIEHLNNKTFNVEDTKFLKEIEALATLKSTK
CRFFKYLNMEESENSAYKLLLDIGYWDEFFNPHLYRYGAELESNPAEFRYNSGSDSQRVD
LTHLTAYAIDDEGSNDPDDAISWDAQQNKMWVHIADPSSSISFGDEVDLEARARGSNLYV
PEHVITMLPPQATQKLGLGLQEVSPALSVGFRLDESGDIHDIEICFSNIKVTRYSYEFVE
ENISALELGDIEVYAKYFTDKRLAKGAVELDFPEIKISLDNDKNVKLTDLPRLNSRTLVR
DTMLMAGVAIGQFCKENNICVPFSTQPEHDLEQDDLDNIDSIADMFATRKKLQRGKYSTE
PDVHAGMGLDSYVQVTSPLRRYLDLLVHYQLRNFLENKQMISVDDVDNIIAQVDIPIKSN
RQTERFSNSHWKLVYLMQNPNLEFQAAVIEKLDKGRLMVSIADLAMTKKLAVSGKYDLND
QIKLQNTSVNLVTQEAFFKVIEEN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaaaatcagagcatcaaaaatgccttagtaatttttaaatcaaaacctgca
aaggttgtagagatattagataaaaaaatagaaatagaaactttagatagtaagaatata
aaattacctgcaaaaaatgtccaaatactcacagttgtagaaaatgattttgatttggat
aaacttgagaaattagaaattcctgagttagagttaacatgggagttgttacaagagcaa
caacaaacatcaattgatgagttaagtgagcttctttttgaatccgtaggagctaatcaa
gcttatactgtatggcttttggtttcagatggagagtattttagctttaatgatgacttt
actatcaatattcattcacaagagcaaaaaaatcaaatagttagcgataaacaagagaag
ctcagaaaagaacaagaactaaatgatttcatagagcatctcaataataagacttttaat
gttgaagacacaaagttccttaaagagatagaggctttagcaacacttaaaagtactaaa
tgtcgtttctttaaatacttaaatatggaagagtctgagaatagtgcgtataagctactc
ttggatattggttattgggatgaattctttaatcctcatttatatcgatatggtgctgag
ttagaaagtaatcctgcggaatttagatataattctgggtcagatagtcagcgtgtcgat
ctaacgcatctgactgcttatgctatagatgatgagggtagtaatgaccctgatgatgcg
ataagttgggatgctcaacaaaataaaatgtgggttcatatagctgatccatcgtctagt
attagttttggcgatgaagtagatcttgaggctagagcgcgaggttctaacttatatgtg
ccagagcatgtaattacgatgttgccacctcaagcaacacaaaagttaggtttaggccta
caagaagtatctccagctttgtcagtaggatttagacttgatgagtcaggtgatattcat
gatattgagatatgttttagtaatataaaagttactagatattcttatgagttcgttgaa
gaaaatatctctgctctagaacttggagacatagaggtttatgctaaatatttcactgat
aagcgtttggcaaagggagcggtagaacttgattttcctgagataaaaatatcattagat
aatgataagaatgtcaagctaactgacttaccacgcttaaactcaagaacattggtacgt
gatactatgctgatggctggtgttgcgattggacagttttgtaaagaaaataatatttgt
gtacctttttcgacacagccagagcatgatcttgagcaagatgatttagataatattgac
tcgatagccgatatgtttgcaacacgtaaaaagctccaaagaggtaaatactctacagaa
cctgatgttcacgcaggtatgggtttagactcttatgtacaagtgacaagccctctaaga
aggtatttagatttacttgttcattatcagttacgcaatttcttagaaaataagcaaatg
attagtgttgatgatgttgataatataattgctcaagtagatattcctattaagtcaaat
aggcaaacggagcgtttttctaattctcattggaaattagtctatctaatgcagaatcct
aatttagagttccaagctgcagtcattgaaaaattagataaaggtcgtttaatggtttct
atcgcagatttagcgatgactaaaaaacttgctgttagtggtaagtacgatttaaatgat
caaataaaattacaaaacacctctgtaaaccttgttacacaagaggctttctttaaggtt
attgaagagaattaa
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