Francisella philomiragia O#319-036: LA56_1835
Help
Entry
LA56_1835 CDS
T03618
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03030
DNA replication
fpm03430
Mismatch repair
fpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA56_1835 (dnaE)
03430 Mismatch repair
LA56_1835 (dnaE)
03440 Homologous recombination
LA56_1835 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpm03032
]
LA56_1835 (dnaE)
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_1835 (dnaE)
Enzymes [BR:
fpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA56_1835 (dnaE)
DNA replication proteins [BR:
fpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA56_1835 (dnaE)
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA56_1835 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AJI56115
LinkDB
All DBs
Position
1871545..1875024
Genome browser
AA seq
1159 aa
AA seq
DB search
MFSHLRIHTGYSVVDSTVRLGDLFARAKDKNIVAVALTDVCNLFAAVKFYKQALSNGVKP
IFGVELKIDTEFGVCDLVLLAENNQGYQNIVNLVSKAYQEADRFGSIPLIPKDWLKNINL
ANVICLNGGQNGEFGKAILAKDDIRVEEIISENIAIFGRDNYIIEIHKLEYENEGLYSEK
ALELASKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSAD
EMYQTFSELPVLLENTLAIAKRCNVTFDLGKPCLPTVDIPDGLTEREYFSKLCYQGLDKR
LAKILENRPVDKHEHIIKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEEVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPVYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAIASINAKRSANETPLDISDIPLDDEKTFKLLQA
GKTIGIFQLESQGMQQIVKDLGTSNFEEIIALVALYRPGPMENIPTFVDRKHGRKQTIYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGGADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDAKNMGITVLAPNVNKSVYDCIAASKGTILLGLGAIKGLGGEAIKS
ILNEREASGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISKNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDTELERECIVEEWNLRELLINEKKALGMYFSGHII
DGESHWRNHVSFSDLEKIQKPNMDGNSVRIIASMITPPARRKTKTGRVLYIINIDDEFDR
ADCLVGEDVFAAVKDNIQVDDVVVVEGKVSRDNQRECNKLSVDKVQLISQYIDENFSKVE
LNLRSQNVNPTNLKKVLDNLKKNIATTDIQRENVLEIKVSLDDVDAKFEYFRKPFSVYEF
VNDISRLIAEGTTVSLGGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcatcttcgtatccatacaggatattctgttgttgatagtacagttcgattg
ggtgatctttttgctcgagcaaaagacaaaaatattgttgcagtagcattaacggacgta
tgtaatttattcgctgcggttaaattttataagcaagctttatcaaatggagttaaacct
atctttggcgtagagctaaagattgatacagagtttggtgtatgtgacttagtactatta
gcagaaaataatcaaggctatcaaaatattgtcaatttagtttcaaaagcatatcaagag
gctgataggtttggttcaataccattaatccccaaagactggctaaaaaatataaatttg
gcaaatgtcatctgtctaaatggtggtcagaatggagagtttggcaaagctattttagct
aaggacgatatcagggttgaagaaattattagtgaaaatatcgcaatttttggtagagat
aattatattatcgaaattcacaaacttgagtatgaaaatgaaggcttatatagcgagaaa
gcgcttgaacttgcgagtaagcataatctcatagcagtagcgacaaatttaactgttttt
atggagtcagatgattatgatattcatgaaatcagagcttgtatcaatgaaaaaacgaca
atccttgatgagtcgcgcaaatctaaatttacaagagagcaatatctaaaatcagctgat
gaaatgtatcaaactttctcagagttaccagtattgttagagaatactttggcaatagca
aaacgctgtaatgtaacatttgatttaggtaaaccatgtttgccaaccgttgatattcca
gatggtttaacagagagagagtacttttcaaagctatgctatcaaggtttagataaacgt
ttagcaaaaattctagaaaatagaccagttgataaacatgagcatattataaaagtttac
aaagatagactgcaacgcgagatcgatattatctgcgatatgggctttcctggttatttc
ttgatagttgaagatttcattagatggtcaaaagagaatgatatccctgtaggtccaggg
cgtggttctggtgctggttcattagtagcttattcattgcttattaccgatattgatcct
ttaccgtatgggttactttttgagagatttctaaatcctgaaagggtgtcgatgcccgat
tttgatattgatttctgtatccaaggtagagatagagttatcaaatatgtagagcaaaaa
tatggtaagcaaagtgttgggcaaattatcacctacggtactatggctgctaaaggtgta
gtgcgagatgttgtgcgtgtaatgggacagagttttggtttcggagataggattgctaag
ctaataccagaaacgccagggacaacatttaagaagattctccatgaaggtgaacctcta
tatgatgaaatgcaggcagatgaagaagttgctgagattgttgaaaaagcccaaaaatta
gaaggtctaccacgaagcctgggcaaacatgccgcaggtattgtgatatcgccaacggtg
atatcagattttgctccagtatattgtgaagataaaggtggagatatagttacccaattt
gataagggcgatgttgaagatgttggtcttgttaagtttgatttcttgggactgaaaaac
ttaacaattatcaaaaatgctattgcaagcatcaatgctaagagatcagctaatgaaacg
cctctagatatttctgatattcctcttgatgatgagaaaacatttaaactgcttcaagct
ggtaaaactatcggtatatttcagctagagtcacaaggtatgcaacagattgtcaaagat
cttggcacatcaaattttgaggagattatcgccttagtagcactatatcgtcctggtccg
atggagaatatcccaacatttgtagatcgcaaacatggtagaaagcaaactatctattta
catccattactagaagaagtgcttagagagacttatggtataccagtttatcaagagcag
gtaatgcaaatggcgcagaagctagctggttacactcttggtggagcagatttattgcgt
cgtgcaatgggtaagaaaaagccagaagagatggagcaacagcgtaaaatcttcaaagag
ggcgccgctaaatatcataatatcgaagctggacttgctgatgagatatttgaccaaatg
gaagcctttgctggctatggtttcaacaaatctcatgctgcggcttacgcgttgattgct
tatcaaactgcttggttaaaagctcattatcctgatgaatatatggctgctcttatgtca
ggagatatgggtaatacagatcagttggttaaatttattttagatgctaagaatatgggt
ataacagtcttagcaccaaatgtaaataagagtgtctatgattgtattgcagcttcaaaa
ggaacgattttattgggtctaggtgctatcaaaggtcttggtggtgaggctatcaagagt
atacttaatgagcgagaagcttcaggggagtttagttctatttttgacttaactcgtaga
gtagacttgcgtaaggttaataaaaaagcactagaagccttatgttttgcaggagctatc
aaggatatatctaaaaatagagcaacagcttttaactctatcgaaaaagctatcaaaaac
gctggttatgtgaatgaaatggctgctgcagggcaaaatgatttatttggtttcacagaa
caagagagtgatactgatacagagcttgaaagagaatgtattgtagaggagtggaatctt
agagagcttttgattaatgagaaaaaagcattaggaatgtatttctcagggcatattatt
gatggtgaaagtcattggcgtaatcatgttagctttagtgatcttgagaaaatccaaaaa
ccaaatatggatggtaattcagtcagaataatcgcaagtatgataacaccaccagctaga
cgaaaaactaaaactggtagagttctgtatattattaatattgatgatgaatttgataga
gcagattgtctagttggtgaagatgtgtttgctgcagttaaggataatatccaagttgat
gatgtggttgtagtagagggtaaagttagccgtgataatcaaagagagtgcaataaacta
agtgttgataaggtacaactgatatcacagtatattgatgagaattttagtaaagttgag
ctgaatcttagaagtcaaaatgtaaaccctacaaacctaaaaaaagtattagataacctc
aagaaaaatatagctactactgatattcaaagagaaaatgtcttagaaataaaagtatct
ctagatgatgttgatgctaagtttgaatattttcgaaagcccttctcagtgtatgagttt
gttaatgatattagtaggttaatagcggagggtactactgttagtttgggtggggtttaa
DBGET
integrated database retrieval system
