Francisella philomiragia O#319-036: LA56_214
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Entry
LA56_214 CDS
T03618
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LA56_214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_214
Enzymes [BR:
fpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LA56_214
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LA56_214
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA56_214
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA56_214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Exonuc_X-T_C
Motif
Other DBs
NCBI-ProteinID:
AJI54457
LinkDB
All DBs
Position
230974..232422
Genome browser
AA seq
482 aa
AA seq
DB search
MFQNQTFLFYDLETTGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPIATI
THHISIAQANTGVSEYQAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNDALKWPKVVDEEGQKKISLKLENLNTENNLYSGGRAH
DAITDVIVTVELAKKLRIANPKMWQFLLAKFNKQNDENTLAQLDIGIEVGGIGYRQAIAV
SGVFGFKNNFMSAILDIGQHRHYKNQEIFLRLDSYLFSEFIEEFGSLEAEHWRLTVNKKW
GDIPLILPAKTRFVGRLPQDRLDLIKTNKEFIRSNPEIFANFVDYVLEYKYPEIENVDID
AAIYQSDFMSAADERGCDKFHTSQIYQKAQMLNQLPKPYYDRAVRIIGRLDFSKLPDKAQ
MEFQDYLNKIVSLDNDELLIDHKGKTRKTLEDIYQEMQDLRMNRDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaatcaaacttttttattttatgacttagaaactactggtattaacaattct
tttgaccaagtattacaatttgctgcgattcgtacagatttggactttaatgaaattgaa
aggtttaatttttttgtgaagctaaatcctgatacaactccatctccaattgcaacgata
acgcatcatatttctattgctcaagcaaatactggtgtgtcagagtatcaggcaattagg
aaaattcataaaatcataaatacaccagggaccattagtataggttataatacccttggt
tttgatgatgagtttttgagatttgctttttataaaaatatgctacctccatatagtcat
caatttaaaaatggttgttcaagggctgatttgtttccaatagttacttgctattattta
ttttgtaatgatgctcttaagtggcctaaagttgttgatgaagaaggacagaagaaaata
tctttgaagttagaaaatttaaatactgaaaataatctatatagtggtggtagagctcat
gatgctattacagatgtaattgtcacagtagagctagctaaaaagttaagaatagctaat
cctaaaatgtggcagtttttattggcaaagtttaataagcaaaatgatgaaaatactcta
gctcaactagatattggtatagaagtcggtggtattgggtatagacaagcaattgcagta
agtggagtttttggctttaaaaataattttatgtcggccatattagatattggtcagcat
agacactataaaaatcaagagatatttcttcgcttagatagttatttatttagtgaattt
atagaagaatttggcagtttagaagcagaacattggcgactgactgtaaataagaaatgg
ggtgatattccgctaatattacctgctaaaactcgttttgtggggagattacctcaagat
agactagatttgataaagacgaacaaagaatttataagaagcaatccagaaatatttgcc
aattttgttgattatgtattggaatataagtatccagagattgaaaatgttgatatagat
gcagcgatttatcaaagtgactttatgagtgccgctgatgaaaggggttgtgataaattt
catacttcacaaatttatcaaaaagcgcaaatgcttaatcaattaccaaaaccttattat
gacagagctgtcaggataattggtagattagacttttcaaaactacctgataaagcacag
atggaatttcaagattatctaaataagattgttagcctagataacgatgagcttttgatt
gatcataaaggtaaaactcgcaaaactttggaagatatctatcaagaaatgcaagattta
cgcatgaatcgtgatttaacagaagagcaacaagctttgctgtatgagttagaggagtat
ttattttag
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