Francisella philomiragia O#319-036: LA56_215
Help
Entry
LA56_215 CDS
T03618
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA56_215 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_215 (uvrB)
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA56_215 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA56_215 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
eIF3_p135
SWI2_SNF2
Microtub_bd
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AJI55326
LinkDB
All DBs
Position
232423..234429
Genome browser
AA seq
668 aa
AA seq
DB search
MNKFNLVTKYAPAGDQPNAIKSLVEGINNGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
IVAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISVIDSLTSKKIKTLHRA
TIFPSTHYVTSKERKDIVIEEIKAELKERVKYFEEEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGDPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFNEFESLLPQTIYVSATPANYELEKSQNTVEQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAKEERILITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRQLQDEHNKKNNITPKTIIKSIDDMLDSSPE
MQKRAYKNNSRLKVDDVDVSAILGMTEASKVIKALEKRMRAYAKELEFEQATAIRDKITE
IKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttaacctagtaacaaagtatgctccagctggagatcagccaaatgcaatt
aaatccttagttgaaggtattaataatgggttacagcatcaggttttgctaggagttaca
ggttctggtaaaacatatactatggcaaatgtgattcaacaaacacaaaaaccatgtttg
attgttgcacataacaaaactttagcagctcaattatattcagagtttaagcaatatttc
ccagataatgcagttgagtattttgtatcatattacgattattatcaacctgaagcttat
gttgcggcttctgatacctatatagaaaaagattcatctgtaaatgagcatattgaacaa
atgcgtctgtcagctaccaaggcaatacttgagcgtaatgatgtaattatagtcgcaacc
gtatcagctatttatggtctaggcgatcctgagcaatatatgcagatgcttttgcaccta
aaagtaggtgaagagctagggctaaaaaaagctcaaactaagttagtagagatgcaatat
tcgcgtaatgatatggatttcagtcgtggtagttttcgagttaggggagaagtattagat
atattcccagcagactcagagaaagatgctattcgagtagagttttttgatgatgagatt
gaagcgataagtgtgatcgattcattaacttccaaaaaaattaaaacattacacagagca
acaatattcccaagtacacattatgttacatcaaaagagcgcaaagatatagttatagaa
gagatcaaagcagaacttaaagaaagagttaaatattttgaggaagaaggtaaactactt
gaagctcaaagaatagaacaacgtactaagtatgatattgaaatgattcaagagcttggc
tactgtacaggcattgaaaattattcaagattgttatcaggtagagctcctggtgatcca
ccaccaacattgattgactacttaccagaaaatgccttagtcatagttgatgagtcgcac
gtgacattaccacagtttggtggaatgtacaaaggagatttatctcgtaaatcaaatctc
gttaactatggtttcagattgccttctgcgttggacaatagacctctgaaatttaatgag
tttgagagtctgctacctcagacaatatatgtatctgcgacacccgctaattatgaactt
gaaaagtctcaaaatactgtagagcaagtaatcagaccaactggtttattagatcctgaa
gtctttgtaagaccggtagctatacaagtagaagatgctttatcagagataaataaagct
atagccaaagaagaaagaatcttgataacaactttaaccaaaaaaatggcagaaaattta
acagagtatctatctgagcatggcgttaatgtcagatatctacattctgatattgatact
gttgagagagtccaaattattcatgatttgcgtcatggtgtatttgatgtgcttgtaggt
attaaccttcttagagaggggcttgatatgccagaggttggagttttattaatttttgat
gctgataaggaagggtttttgcgttctgaaaaatctcttattcaaactattggacgtgtg
gctagaaaccaaaatggtagagctattttgtatgcagatgtcgttacaaaatctatgaaa
aaggctatggatgaaactctacgtcgtcgtcaacttcaagatgaacataataagaaaaac
aatattacgcctaaaacaatcatcaaaagtatagatgatatgttagatagttctccagag
atgcaaaaacgtgcatataaaaataattcgcgcttaaaggttgatgatgtagatgtttcg
gctatactaggtatgactgaagcttcgaaggttattaaagctctagaaaaacgaatgaga
gcttatgcaaaagagcttgaattcgagcaggcaacagcaattagagataagataactgaa
ataaagcagaagtttattaatttataa
DBGET
integrated database retrieval system
