Francisella philomiragia O#319-036: LA56_46
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Entry
LA56_46 CDS
T03618
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03410
Base excision repair
fpm03430
Mismatch repair
fpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LA56_46 (recJ)
03430 Mismatch repair
LA56_46 (recJ)
03440 Homologous recombination
LA56_46 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_46 (recJ)
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LA56_46 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LA56_46 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LA56_46 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
AJI56050
LinkDB
All DBs
Position
complement(50322..52064)
Genome browser
AA seq
580 aa
AA seq
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MLIRQKQTNQDILSTLLSKGYDLFLARIISSRVSNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNNEVIGLETDHDCDGQTSHAILYEALTKIFNYPKDKIRSYIGHRMLEGY
GLSESLMNRILTDSTRPNLIITADNGSTDEPRIAVLKQNGIDIIVTDHHGIPPEGAPKSA
IAVLNPTQHDCNYPDKAIAGCMVAWLFMTALRRKYLQNGKSLSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKEKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDERKIEETYENLTKQNNQRKEIQKKLTHEAITKAHQLDNNNNSLCILLN
DGHSGIHGITASRVKEMFGKPVIIFSETQNDPNLISGSARSVDSINIKTILDTIALKSPA
LMIKYGGHKGAAGLTINKSDFDTFYDLFESEIINFIKNDSISLEPILEYDFELDENDFKL
QTLEKIESLEPFGREFEKPLFYNSFTIENLRLVGKDKNHAQLILRYKNIPSIKAIWFNAL
ENKIIEQIGIGDTIRACYELQKEEFLGQTNLSLNIKLIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttaataagacaaaaacaaactaatcaagatatattatctaccctattatcaaaaggt
tatgacttatttttagcacggattatctcttctagagtaagtaattttgagaatattgat
cttatactaaaaggctctataaaagatctatcatctccatttctattcaaagatattgat
aaagctgttgatcgactttttcaagcattacaaaataatgaagttattggattggaaact
gatcatgactgtgatggtcaaacatctcatgcaattttatatgaagctctgacaaagata
ttcaattatcctaaagataagattcgctcatatataggacatagaatgctagaaggatat
ggtctgtctgagtctctgatgaatagaatattaacagacagtactagaccaaatcttatc
ataacagctgataatggttcaacagatgagcctaggattgctgttcttaaacaaaatgga
attgatattatcgtaactgatcaccatggtattcctcctgagggagcgcctaaaagtgct
atcgccgtactaaaccctactcaacatgattgtaattatccagacaaagctatagctggt
tgtatggttgcttggctttttatgacggctcttcgtagaaaatatctgcaaaatggtaaa
tcattatctaagtcttatggattaagtaatttacttgattttgttgcaattggtacagtt
gcggattgtgttagtatggcaaatagtcataataaccgtattgttacaaaactaggtata
gagcaacttaagaataacgatcgtctatgttgggacttcttagataaagagaaactatca
agtgagtatattagtttcagtatagctcccttgctaaatagtgatggaagagtttctgat
gcactagggtctgttagctttttgcttgagaatgatgaacgcaaaattgaagaaacgtac
gaaaacctaactaagcaaaataaccaacgtaaagaaattcaaaaaaagcttactcatgaa
gcaataaccaaagcacatcaattagacaataataacaactcattatgtatactacttaat
gatggtcattctggaattcatggtattacagcaagtagagtcaaagaaatgtttggtaag
cctgtgattattttttctgaaacacaaaatgatcctaacttaatatcaggttctgctagg
agtgtagatagtattaacattaaaacgatacttgatactatagcacttaaatcgcctgct
ttaatgataaaatatggtggtcataaaggtgctgctggcttaacaataaacaaatctgat
ttcgatactttttatgatttatttgaaagtgaaattatcaatttcattaaaaatgacagt
atatctttagagcctattttagagtatgattttgaacttgatgaaaatgatttcaaacta
caaactctagaaaagatagaatctcttgaaccatttggtagagaatttgaaaaaccacta
ttttacaacagttttactatagagaatctacgtttagttggtaaagataaaaatcatgca
caactaattttacgctataaaaatattccttcaatcaaagcgatatggtttaatgcctta
gaaaataaaataattgaacaaataggtattggcgataccataagagcctgttatgaactt
caaaaagaagaattcctcgggcagacaaacttatctctcaatattaaacttatcgaaaaa
tga
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