Francisella philomiragia O#319-036: LA56_836
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Entry
LA56_836 CDS
T03618
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fpm
Francisella philomiragia O#319-036
Pathway
fpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA56_836 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpm03400
]
LA56_836 (recD)
Enzymes [BR:
fpm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LA56_836 (recD)
DNA repair and recombination proteins [BR:
fpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA56_836 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
UvrD-helicase
NAT10_TcmA_helicase
UvrD_C
SLFN-g3_helicase
SH3_13
ResIII
AAA_22
DEAD
PhoH
Flavi_DEAD
nSTAND3
NACHT
RecD_N
TrwB_AAD_bind
AAA_12
TIP49
SRP54
AAA_24
ATP-synt_ab
PIF1
AAA_7
NTPase_1
Terminase_6N
AAA_28
FtsK_SpoIIIE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AJI55965
LinkDB
All DBs
Position
complement(841535..843310)
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AA seq
591 aa
AA seq
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MYKTFHQACEQLADIRAIDFFFAKEVFDLVKKTTPSIITLSSELYPPLHGAKGNDLEQKS
NEVLFHILIKLMHVYSHGHSCLKIADISNKTIFASEQSTQSDAKVGFKMPSFDEIVSILE
SLDYDKLPIYFAKEYDSLYIKRLWNYEVEIANFINSRTIQNTQQDNYIEEVVDKLFEPAD
EIDWQKQAVIKSLNYNFSIISGGPGTGKTTTVAKLLLAIQMSNQNQQRIALLAPTGKAAQ
RMTESLNSVLSKRVDNDSYLGLSNLEAQTIHRFLGLRPNSTYVKYNEQSKAPYDVIIVDE
ASMLDMNIFIKLIRAVADNTKLILIGDTNQLPSVEAGSLLANFTHHRDGDITPYRTLLIK
NYRSQQYINNLAASVLKGDINIDSHQNENINFHSIRNLDTYLRDYAKRYSRLEKCSDYKE
ALTELNKFRILVANKNLEIGTDKLNQKIEKFMSKPIDSNYKGKPIMITQNSYSLGLFNGD
VGIIWPDDTGKLRAYFDGKDAKAFSLNMLPKYESVYAMTIHKTQGSEFDEIVIILPAEDN
EALSKQLLYTAITRAKHKLTIISEQSSLSDIAQKDIKRNSNISELVSLSTQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaactttccatcaagcttgtgagcaattagcagatattagagctatagatttt
ttctttgctaaagaagtgtttgatttagtcaaaaagactaccccgtctataatcactttg
tcaagtgagttatatccaccccttcacggagcgaaggggaacgatttggaacaaaaaagt
aatgaagttttatttcatattttgataaagcttatgcatgtatatagccatggtcatagc
tgtttgaagatagcagatatatcaaataaaactatttttgcttcagagcaaagcactcag
agcgatgctaaagtaggctttaaaatgccaagttttgatgaaattgtaagtattttagag
tccttagattatgataaattacctatatatttcgctaaagagtatgattccttatatatc
aaaagattgtggaattatgaagttgaaatagctaactttataaattcaagaacaattcaa
aatactcaacaagataactatattgaagaagttgtagataagctatttgaacctgctgat
gagatagattggcaaaaacaggcagttatcaaaagtctaaattataattttagtattatc
tcaggtggacctggcacaggtaagacaactacagtcgcaaagcttttgcttgctatacaa
atgagtaatcaaaatcagcaaagaatagctcttttagcaccaacaggtaaggctgcccag
agaatgacggaatccttaaatagtgtattaagtaaaagggtagacaatgatagttattta
ggattatctaatctagaagctcaaactatacatagatttttaggcttaagaccaaactct
acttatgttaaatataacgagcagtcaaaagcaccatacgatgtgattattgttgatgaa
gcttcgatgcttgatatgaatatttttattaagttgattagagcagtagctgataatact
aagctaattttgataggtgatactaatcagttaccatcagttgaggctggtagtcttttg
gcaaactttacacaccacagagatggcgatattacgccatatagaacattacttatcaaa
aactatcgttcacaacaatatataaataatcttgcagcctcagttctaaaaggtgatatt
aatattgatagtcatcaaaatgagaatattaattttcatagcataaggaatttagatact
tatttaagagattatgcaaagagatattcacggcttgaaaagtgcagtgactacaaagag
gctcttaccgagctaaataaatttagaatacttgtagctaataaaaatttagaaattggt
acagataagttaaatcagaaaattgagaaatttatgtctaaacctatagattctaactat
aagggtaaaccaattatgataactcaaaatagttattcattgggattattcaatggagat
gtagggattatctggccagatgatactggtaagcttcgagcatattttgatggtaaagat
gctaaggcttttagtttaaatatgctaccaaaatatgaaagtgtttatgccatgacaatt
cataagacgcaaggttcagagtttgatgaaatcgtgattattcttccagcagaagataat
gaagcgttaagtaaacagcttctgtatacagctattaccagagccaaacataaattaacg
attatttctgaacaaagtagcttaagtgatattgctcagaaagatattaagagaaattcc
aatattagtgaattagttagcttgagcactcaataa
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