Fictibacillus phosphorivorans: ABE65_000565
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Entry
ABE65_000565 CDS
T04282
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fpn
Fictibacillus phosphorivorans
Pathway
fpn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABE65_000565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpn03021
]
ABE65_000565
03400 DNA repair and recombination proteins [BR:
fpn03400
]
ABE65_000565
Enzymes [BR:
fpn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABE65_000565
Transcription machinery [BR:
fpn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABE65_000565
DNA repair and recombination proteins [BR:
fpn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABE65_000565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ANC75442
UniProt:
A0A160IJP7
LinkDB
All DBs
Position
112308..115931
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRDRMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDTGDTPLEKKQLLSEKEYRTYREKYGKGFTAQMGAEAIKRLLE
DIDAEKEVEMLKEELKTAQGQRRTRAIKRLEVLEAFRHSGNHADWMILEVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVQPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGSVFKDINEAIIAYENGFVHLHSRIAVP
VSSLNKETFTDEQQSKLLMTTVGKLLFNEILPPSFPYINEPTTTNLQVETPEKYFLDPAA
NVKEEIQKHEEIVPFKKGILGKIIAEVFKRFKITETSKMLDRMKDLGFKYSTRAGITIGV
SDIVVLPEKQEILAVAEEKVVNVTKQFRRGLITEEERYERVINVWSLAKDEIQNKLMGTL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGKIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLEVAAIKEGNEVIEPLH
ERLIGRTAYKKVYHPETKELLADVNQLITEDMAAHIEEVGVKAVTIRSVFTCDTRHGVCK
KCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISELEGTVVGVNDNKDKREVVVQGEIESRSYTIPFGARIKAVEGDKVTAG
QVLTEGSIDPKELIKVRGAEGVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRII
DSGDSQVLPGALMDIHAFTDVNRSVLLEGGTPATGRPVLLGITKASLETESFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLIPAGTGMNRYRNIGINSPVVEDENNEEAELP
TELVSQD
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgtaaataattttgaatatatgaaaattggtcttgcttcaccggacaaaatc
cggtcgtggtcaagaggggaagtaaaaaaacctgaaacaatcaactaccgtacacttaag
cctgaaaaagacggcttgttctgtgaaagaattttcggtcctacaaaagactgggaatgt
cattgcggaaagtataagcgcgtccgttataaaggcgtggtttgtgaccgttgtggtgtt
gaagtaacaagagctaaagttcgacgtgaccgtatgggtcacatcgagcttgctgctcct
gtgtctcacatttggtacttcaaaggtatcccaagccgtatgggtcttgttttggatatg
tctccaagagcattagaagaagtaatctattttgcttcatacgttgttactgatacagga
gatactcctcttgagaagaaacaactgctttcagagaaggaataccgcacataccgtgaa
aagtatggaaaaggtttcactgcacaaatgggtgcagaagcgatcaaacgtcttttagaa
gacatcgatgctgaaaaagaagtagagatgttaaaagaagagcttaaaacagcacaaggt
caacgccgtacacgtgcgattaagcgtttagaagtactagaagcattccgtcactcgggc
aaccatgctgattggatgattctagaagtgcttccggttattccaccggaattgcgtcct
atggttcagcttgatggtggacgttttgccacatctgatcttaacgacctttaccgtcgt
gttatcaaccgtaacaaccgtttgaagcgtctattagacctaggtgctcctaacattatc
gttcaaaatgaaaaacgtatgcttcaagaagcagtcgatgcattaatcgataatggtcgt
cgtggccgtccggttactggaccaggaaatcgtccgttaaaatcactttcacacatgctg
aaagggaaacaaggtcgtttccgtcaaaacttgctaggtaaacgtgttgactactctgga
cgttcggttatcgtagtaggtccgaacttaaagatgtaccaatgtggtcttcctaaagag
atggcacttgagctctttaaaccatttgttatgaaagagctagtttcaaaaggtcttgca
cacaacatcaagagtgcaaaacgcaaagtagagcgcgttcagccagaagtttgggatgtt
ttagaagaagttattcgtgaacacccagttctactaaaccgtgcacctacacttcacaga
cttggtatccaagcattcgaacctacgcttgtagaaggtcgtgcaatccgtcttcacccg
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcggtccacgttcct
ttatctgctgaagcacaagcagaggctcgtatcttaatgctagctgcacaaaacatcttg
aacccgaaagatggtaagccagtagttacaccatcacaggatatggttttaggtaactat
tacctaactcttgaacgtgaaggagctattggtgaagggtctgtatttaaagatatcaac
gaagcgatcatcgcttatgaaaatggattcgtgcacttgcattctcgtattgcagtaccg
gtatccagcttaaataaagaaactttcacagatgaacagcaatctaagcttcttatgacg
acagtaggtaagttgttattcaacgagatcctgcctccgtcattcccttacattaacgaa
ccgactacgacgaaccttcaagtggaaacacctgaaaagtacttcttagatccggctgcc
aatgtaaaagaagaaattcagaagcatgaggaaattgttccatttaagaaaggaatccta
ggtaagattatcgcggaagtattcaaacgctttaagattactgaaacgtctaagatgctt
gaccgcatgaaggacttaggatttaaatattctacgcgcgctggtatcacgatcggtgta
tccgatatcgttgtattacctgaaaagcaagagatccttgctgtagccgaagaaaaagta
gttaacgttacaaagcaattcagacgtggtctaatcacggaagaagagcgttatgagcgt
gtaatcaatgtttggagtttggcgaaagacgaaatccaaaacaaattgatgggtacactt
gataagcgaaacccaatctttatgatgagtgactccggtgcccgtggtaacgcatctaac
tttacacagttagctggtatgcgtggtctgatggccaacccggctggtaaaatcatcgag
cttccaatcaaatcaagtttccgtgaaggtctaacagtactcgagtactttatctctact
cacggagcgcgtaaaggtcttgccgatacagcccttaaaacagctgactcaggttacctt
actcgtcgtttggttgacgttgctcaagatgttatcgtacgtgaagatgactgtggaacc
gaccgtggcttagaagttgcagctattaaagaaggcaacgaagtaatcgaacctcttcat
gagcgtttgatcggtcgtactgcttataaaaaggtataccatcctgaaacaaaagaactt
cttgcagacgttaatcagttgattactgaagacatggccgctcatattgaagaagtaggc
gtgaaagcagtaacgatccgttctgtatttacttgtgacactcgtcacggtgtttgtaag
aaatgttatggacgtaaccttgcaacaggctctgacgttgaagttggggaagctgttgga
attatcgctgctcaatccatcggtgagccaggtacacagcttacaatgcgtaccttccat
acaggtggggtagcaggagatgatatcacacaaggtcttccgcgtatccaagaattgttt
gaagcacgtaacccgaaaggtcaagcggttatctctgagcttgaaggtacggttgttggt
gtgaacgacaataaagataagcgtgaagtagtcgttcaaggtgaaatcgaatctagatct
tacacgattcctttcggcgcccgcattaaagcggtcgaaggcgataaagtaactgccggt
caagtattgacggaaggttcgatcgaccctaaagaattaattaaagtacgtggtgcagaa
ggcgtacaagaatacctattgcgtgaggtacagaaagtttaccgtatgcaaggggtagaa
atcggagataagcacgttgaggttatggttcgccagatgcttcgtaaagtgcgtatcatc
gattctggtgattcacaagtacttccaggagctcttatggatattcatgcctttacggat
gttaaccgtagtgtacttcttgaaggtggaactcctgctacaggtcgtccggtgcttctt
ggtattacaaaagcatctcttgagacagaatcattcttatctgctgcatcattccaagag
acaactcgagttcttacggatgctgccatcaaaggtaagcgtgacgaattactcggactt
aaggaaaatgttattattggtaagctgatcccggctggaacgggtatgaaccgttacaga
aacattggaatcaactctccagtagttgaagatgagaacaatgaagaggcagaattgcct
acagaacttgtttctcaagattaa
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